RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 POLR2JP52435 117 aaKnown RBP13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 MAPK10P53779 464 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 RAB30Q15771 203 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 AAK1Q2M2I8 961 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 LRRC73Q5JTD7 316 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 TBCELQ5QJ74 424 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 XKR5Q6UX68 686 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 EFL1Q7Z2Z2 1120 aaKnown RBP13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 ADAMTSL2Q86TH1 951 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 ALDH16A1Q8IZ83 802 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 SFRP1Q8N474 314 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 OSBPL11Q9BXB4 747 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 OSBPL6Q9BZF3 934 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 NAA50Q9GZZ1 169 aaKnown RBP13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 INTS7Q9NVH2 962 aaKnown RBP13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 RIC8BQ9NVN3 520 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 DZANK1Q9NVP4 752 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 FBXO10Q9UK96 956 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 USP22Q9UPT9 525 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 SH3GLB1Q9Y371 365 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 PCDHB1Q9Y5F3 818 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 PCDHA9Q9Y5H5 950 aa13.6□□□□□ -0.23
PTCHD3-201ENST00000438700 DHRS12A0PJE2 317 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 OR7A17O14581 309 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ARPC2O15144 300 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 HOXC11O43248 304 aaPredicted RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 CISD3P0C7P0 127 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 HSD17B1P14061 328 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 BPIP17213 487 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ITGALP20701 1170 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 RECQLP46063 649 aaPredicted RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 PLIN5Q00G26 463 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 GTF2H2Q13888 395 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 NR6A1Q15406 480 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 PHKG1Q16816 387 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 NHSL2Q5HYW2 709 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 GTF2H2CQ6P1K8 395 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 CERS6Q6ZMG9 384 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ZBTB49Q6ZSB9 765 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 KIAA2013Q8IYS2 634 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 RBFAQ8N0V3 343 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ZNF786Q8N393 782 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 PROKR1Q8TCW9 393 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 FRS2Q8WU20 508 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 TMEM125Q96AQ2 219 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 EGFL8Q99944 293 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 BRINP2Q9C0B6 783 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 MTG2Q9H4K7 406 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ALG2Q9H553 416 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 IPPKQ9H8X2 491 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 SUN2Q9UH99 717 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 CRLS1Q9UJA2 301 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 GNPTGQ9UJJ9 305 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 FFAR3O14843 346 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 GPR42O15529 346 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 LINC01565O15544 149 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 TULP3O75386 442 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 S100BP04271 92 aaPredicted RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 PRKCQQ04759 706 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 MESP2Q0VG99 397 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 CHRNA6Q15825 494 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ADRM1Q16186 407 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 SLC2A7Q6PXP3 512 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 CRTC1Q6UUV9 634 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 USP45Q70EL2 814 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 CHST15Q7LFX5 561 aaPredicted RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 SNX20Q7Z614 316 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 PATL1Q86TB9 770 aaKnown RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ZBTB8BQ8NAP8 495 aaPredicted RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ERLEC1Q96DZ1 483 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 SCRN2Q96FV2 425 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ZNF641Q96N77 438 aaPredicted RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 CDCA3Q99618 268 aaPredicted RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 PAIP1Q9H074 479 aaKnown RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ARMC7Q9H6L4 198 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 PNPLA3Q9NST1 481 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 ELOVL2Q9NXB9 296 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 CNOT11Q9UKZ1 510 aaKnown RBP13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 V9GYQ6 96 aa13.59□□□□□ -0.23
PTCHD3-201ENST00000438700 GLYATL1P3A0A0U1RQE8 302 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 OTOL1A6NHN0 477 aaPredicted RBP13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 HEPACAM2A8MVW5 462 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 DLGAP1O14490 977 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 RAD51BO15315 384 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 INPP4BO15327 924 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 G6PDP11413 515 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 PSMA4P25789 261 aaKnown RBP13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 ACRV1P26436 265 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 GSK3BP49841 420 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 ABRAXAS2Q15018 415 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 LRRC66Q68CR7 880 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 MBOAT1Q6ZNC8 495 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 GPR180Q86V85 440 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 DUS3LQ96G46 650 aaKnown RBP13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 LYSMD1Q96S90 227 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 UHRF1Q96T88 793 aaPredicted RBP13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 KCTD14Q9BQ13 255 aaPredicted RBP13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 TRIM54Q9BYV2 358 aa13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 CLK4Q9HAZ1 481 aaKnown RBP13.58□□□□□ -0.23
PTCHD3-201ENST00000438700 PFDN4Q9NQP4 134 aa13.58□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms