RNA–Protein interactions for RNA: ENST00000438594.2

HMGB1P12-201, Transcript of high mobility group box 1 pseudogene 12, humanhuman

BASIC

Gene HMGB1P12, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P12-201ENST00000438594 PLAC9Q5JTB6 97 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 Q5PR19 223 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 LDLRAP1Q5SW96 308 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 C9orf50Q5SZB4 431 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 RARS2Q5T160 578 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 AFMIDQ63HM1 303 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 KRT39Q6A163 491 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ATL3Q6DD88 541 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 KIAA1161Q6NSJ0 714 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 FAM173BQ6P4H8 233 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 PODNL1Q6PEZ8 512 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLEC9AQ6UXN8 241 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 C11orf57Q6ZUT1 292 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 GPR142Q7Z601 462 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ADIPOR2Q86V24 386 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 FAM219AQ8IW50 185 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 C12orf56Q8IXR9 622 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CRYBG2Q8N1P7 616 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 FADS6Q8N9I5 356 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 C8orf58Q8NAV2 365 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 BPIFCQ8NFQ6 507 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR52B4Q8NGK2 314 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR6S1Q8NH40 331 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ERMNQ8TAM6 284 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 SUN3Q8TAQ9 357 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLEC4CQ8WTT0 213 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 HEXDCQ8WVB3 486 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 MAIP1Q8WWC4 291 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 RLN3Q8WXF3 142 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR1E3Q8WZA6 343 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 FIG4Q92562 907 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 TFAP2CQ92754 450 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 DPF1Q92782 380 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF707Q96C28 371 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 ZNF778Q96MU6 729 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 PANX3Q96QZ0 392 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 PCYT2Q99447 389 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 COQ7Q99807 217 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 IFIH1Q9BYX4 1025 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 FRMD8P1Q9BZ68 369 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 UBQLN3Q9H347 655 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 AZI2Q9H6S1 392 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 TDRD3Q9H7E2 651 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 NOL11Q9H8H0 719 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 SRD5A3Q9H8P0 318 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 LMAN1LQ9HAT1 526 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CYP3A43Q9HB55 503 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 GLOD4Q9HC38 313 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 TREM1Q9NP99 234 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 KCNK9Q9NPC2 374 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 PAG1Q9NWQ8 432 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 KLHL28Q9NXS3 571 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 DBF4Q9UBU7 674 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 SERGEFQ9UGK8 458 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 HAO1Q9UJM8 370 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 EXO1Q9UQ84 846 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 NIP7Q9Y221 180 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 CBY1Q9Y3M2 126 aa3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 HBS1LQ9Y450 684 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.55□□□□□ -1.84
HMGB1P12-201ENST00000438594 AATKQ6ZMQ8 1374 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 PFASO15067 1338 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SH3TC1Q8TE82 1336 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3DA0A087WVF3 549 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3IA0A087WXS9 549 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3EA0A087X179 549 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3KA0A087X1G2 549 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 C13orf42A0A1B0GVH6 325 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3BA6NDS4 549 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 BTBD17A6NE02 478 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3FA6NER0 549 aaPredicted RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 HELTA6NFD8 242 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 OR52A4PA6NMU1 304 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 MAGEB17A8MXT2 336 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3LB9A6J9 549 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ADM5C9JUS6 153 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TRDMT1O14717 391 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 MAP2K7O14733 419 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 DCLK1O15075 740 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ANKRD28O15084 1053 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TEX28O15482 410 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ARHGEF9O43307 516 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 DCXO43602 365 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 RGS10O43665 173 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SULT1B1O43704 296 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 HSF2BPO75031 334 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 VPS4BO75351 444 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 NDUFS3O75489 264 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 CLPTM1O96005 669 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 CHRM4P08173 479 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 SERPINF2P08697 491 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TBC1D3HP0C7X1 549 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 G6PDP11413 515 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 ANPEPP15144 967 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 RPA2P15927 270 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 POU1F1P28069 291 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 CD1BP29016 333 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 TKTP29401 623 aaKnown RBP3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 AXLP30530 894 aa3.54□□□□□ -1.84
HMGB1P12-201ENST00000438594 FMO4P31512 558 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms