RNA–Protein interactions for RNA: ENST00000438462.1

RTN4-211, Transcript of reticulon 4, humanhuman

TSL 5

Gene RTN4, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-211ENST00000438462 UTP23Q9BRU9 249 aaKnown RBP10.55□□□□□ -0.72
RTN4-211ENST00000438462 DTLQ9NZJ0 730 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 C3orf18Q9UK00 162 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 TRAF3IP3Q9Y228 551 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 CLIC4Q9Y696 253 aa10.55□□□□□ -0.72
RTN4-211ENST00000438462 GRID2IPA4D2P6 1211 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 FIGNL2A6NMB9 653 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 A8MUI8 341 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 GPR89AB7ZAQ6 455 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 NPIPA2E9PIF3 369 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 NPIPA3F8WFD2 350 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 MATN2O00339 956 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 MED7O43513 233 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 PDE9AO76083 593 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 GPR89BP0CG08 455 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 RFC3P40938 356 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 NR0B1P51843 470 aaKnown RBP10.54□□□□□ -0.72
RTN4-211ENST00000438462 ANAPC15P60006 121 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 XRCC4Q13426 336 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 MAPKAPK3Q16644 382 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 FBXL19-AS1Q494R0 122 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 ATP13A4Q4VNC1 1196 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 RAB6CQ53S08 254 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 DCAF17Q5H9S7 520 aaPredicted RBP10.54□□□□□ -0.72
RTN4-211ENST00000438462 RTL6Q6ICC9 239 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 ZNF585AQ6P3V2 769 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 IL17RELQ6ZVW7 336 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 PASD1Q8IV76 773 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 WDTC1Q8N5D0 677 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 METTL27Q8N6F8 245 aaPredicted RBP10.54□□□□□ -0.72
RTN4-211ENST00000438462 C19orf47Q8N9M1 422 aaKnown RBP10.54□□□□□ -0.72
RTN4-211ENST00000438462 OR4E2Q8NGC2 313 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 DHX58Q96C10 678 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 RAB6CQ9H0N0 254 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 ZNF696Q9H7X3 374 aa10.54□□□□□ -0.72
RTN4-211ENST00000438462 FOXD3Q9UJU5 478 aaPredicted RBP10.54□□□□□ -0.72
RTN4-211ENST00000438462 A0A1W2PQ72 361 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 HYKKA2RU49 373 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 H3BQV1 296 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 MTX2O75431 263 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 NEURL1O76050 574 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 ITGA2P17301 1181 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 VCLP18206 1134 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 BMP5P22003 454 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 UGT1A1P22309 533 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 ATP5J2P56134 94 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 AP2B1P63010 937 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 NSUN2Q08J23 767 aaKnown RBP eCLIP10.53□□□□□ -0.72
RTN4-211ENST00000438462 GXYLT1Q4G148 440 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 ACER2Q5QJU3 275 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 TCERG1LQ5VWI1 586 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 SLC25A25Q6KCM7 469 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 TRNP1Q6NT89 227 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 FBXO42Q6P3S6 717 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 BNIPLQ7Z465 357 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 SLC22A8Q8TCC7 542 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 DLG3Q92796 817 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 CFAP57Q96MR6 1250 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 ESRP2Q9H6T0 727 aaKnown RBP10.53□□□□□ -0.72
RTN4-211ENST00000438462 KIR3DX1Q9H7L2 352 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 TRIM39Q9HCM9 518 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 ACP6Q9NPH0 428 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 PLSCR2Q9NRY7 297 aa10.53□□□□□ -0.72
RTN4-211ENST00000438462 EIF3LQ9Y262 564 aaKnown RBP10.53□□□□□ -0.72
RTN4-211ENST00000438462 ARHGAP21Q5T5U3 1957 aa10.52□□□□□ -0.72
RTN4-211ENST00000438462 CMYA5Q8N3K9 4069 aa10.52□□□□□ -0.72
RTN4-211ENST00000438462 PVALEFA0A1B0GWK0 134 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 BTN3A1O00481 513 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 NME2P1O60361 137 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 SLC25A14O95258 325 aaPredicted RBP10.52□□□□□ -0.73
RTN4-211ENST00000438462 PGLSO95336 258 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 PAX1P15863 534 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 NME2P22392 152 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 EPHB2P29323 1055 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 FLT3P36888 993 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 GCGRP47871 477 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 MCCD1P59942 119 aaPredicted RBP10.52□□□□□ -0.73
RTN4-211ENST00000438462 OC90Q02509 493 aaPredicted RBP10.52□□□□□ -0.73
RTN4-211ENST00000438462 CUL4BQ13620 913 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 NFIL3Q16649 462 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 PTPN20Q4JDL3 420 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 ZNF569Q5MCW4 686 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 C20orf204Q6ZNR8 217 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 STRADAQ7RTN6 431 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 KIF18BQ86Y91 864 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 ARIH2OSQ8N7S6 290 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 C1orf131Q8NDD1 294 aaKnown RBP10.52□□□□□ -0.73
RTN4-211ENST00000438462 ZNF606Q8WXB4 792 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 KIAA1191Q96A73 305 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 SYNCQ9H7C4 482 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 TMEM51Q9NW97 253 aa10.52□□□□□ -0.73
RTN4-211ENST00000438462 RCCD1A6NED2 376 aa10.51□□□□□ -0.73
RTN4-211ENST00000438462 TCF21O43680 179 aa10.51□□□□□ -0.73
RTN4-211ENST00000438462 GPRIN2O60269 458 aa10.51□□□□□ -0.73
RTN4-211ENST00000438462 SHOX2O60902 331 aaPredicted RBP10.51□□□□□ -0.73
RTN4-211ENST00000438462 SLC25A12O75746 678 aa10.51□□□□□ -0.73
RTN4-211ENST00000438462 VSIG8P0DPA2 414 aa10.51□□□□□ -0.73
RTN4-211ENST00000438462 KRT5P13647 590 aa10.51□□□□□ -0.73
RTN4-211ENST00000438462 CXCR2P25025 360 aa10.51□□□□□ -0.73
RTN4-211ENST00000438462 OR1D4P47884 311 aa10.51□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms