RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 CREB5Q02930 508 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 TCF15Q12870 199 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 IKZF1Q13422 519 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 OLIG2Q13516 323 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 KCNJ11Q14654 390 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 POU6F1Q14863 301 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 MAPRE2Q15555 327 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 LPAL2Q16609 132 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 KCTD19Q17RG1 926 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 SKIDA1Q1XH10 827 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 MMEL1Q495T6 779 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 PCID2Q5JVF3 399 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 RNASEH2BQ5TBB1 312 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 ALS2CLQ60I27 953 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 LAIR1Q6GTX8 287 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 RAET1GQ6H3X3 334 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 RAB12Q6IQ22 244 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 FAM47EQ6ZV65 393 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 Q6ZVL8 140 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 REC114Q7Z4M0 266 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 HSD11B1LQ7Z5J1 315 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 TMC3Q7Z5M5 1100 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 TSPAN33Q86UF1 283 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 SLC41A1Q8IVJ1 513 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 IFT20Q8IY31 132 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 PDIK1LQ8N165 341 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 MFSD4AQ8N468 514 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 MCUQ8NE86 351 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 DENND6BQ8NEG7 585 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 RFWD2Q8NHY2 731 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 STYXQ8WUJ0 223 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 NCLNQ969V3 563 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 INTS12Q96CB8 462 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 AP2M1Q96CW1 435 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 LOXL4Q96JB6 756 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 ZC3H10Q96K80 434 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 ART5Q96L15 291 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 ATP6V1G3Q96LB4 118 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 TTC25Q96NG3 672 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 SMIM14Q96QK8 99 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 CHCHD6Q9BRQ6 235 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 SPATA16Q9BXB7 569 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 IL22Q9GZX6 179 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 FAM83DQ9H4H8 585 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 CLK4Q9HAZ1 481 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 CRLF2Q9HC73 371 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 EPB41L5Q9HCM4 733 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 BPIFA1Q9NP55 256 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 FAM114A2Q9NRY5 505 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 WHRNQ9P202 907 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 NCDNQ9UBB6 729 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 REV1Q9UBZ9 1251 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 CD84Q9UIB8 345 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 SMG5Q9UPR3 1016 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 ZFR2Q9UPR6 939 aaKnown RBP6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 TMEM5Q9Y2B1 443 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 COQ6Q9Y2Z9 468 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 MAD1L1Q9Y6D9 718 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 REV3LO60673 3130 aa6.09□□□□□ -1.43
ECHDC1-208ENST00000436638 ATXN2Q99700 1313 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 ANKRD36A6QL64 1941 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 A0A1B0GTW7 788 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 TCRBV7S3A2A0A539 114 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 MAGEB16A2A368 324 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 CCDC78A2IDD5 438 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 A6NNZ2 444 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 STMND1H3BQB6 276 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 BCAT2O15382 392 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 ZW10O43264 779 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 FRS3O43559 492 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 LATO43561 262 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 BUD23O43709 281 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 BRINP1O60477 761 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 TMEM63AO94886 807 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 SEC31AO94979 1220 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 LMNAP02545 664 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 OPN1MWP04001 364 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 CFIP05156 583 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 IGHV4-34P06331 123 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 C1SP09871 688 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 OPN1MW2P0DN77 364 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 OPN1MW3P0DN78 364 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 TSHRP16473 764 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 KELP23276 732 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 HTR1BP28222 390 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 HMGCLP35914 325 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 GRIA1P42261 906 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 PTGER3P43115 390 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 GRK6P43250 576 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 ABCG1P45844 678 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 RPL21P46778 160 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 SPINT3P49223 89 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 CLCN7P51798 805 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 THOP1P52888 689 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 ATXN3P54252 364 aaPredicted RBP6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 PMS2P54278 862 aa6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 DRG2P55039 364 aaKnown RBP6.08□□□□□ -1.44
ECHDC1-208ENST00000436638 PRAMEP78395 509 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms