RNA–Protein interactions for RNA: ENST00000436374.5

CCDC144A-209, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 941 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-209ENST00000436374 WWP1Q9H0M0 922 aa17.26■□□□□ 0.35
CCDC144A-209ENST00000436374 INTS9Q9NV88 658 aaKnown RBP17.26■□□□□ 0.35
CCDC144A-209ENST00000436374 FAM53CQ9NYF3 392 aa17.26■□□□□ 0.35
CCDC144A-209ENST00000436374 NCKIPSDQ9NZQ3 722 aa17.26■□□□□ 0.35
CCDC144A-209ENST00000436374 TMEM216Q9P0N5 145 aa17.26■□□□□ 0.35
CCDC144A-209ENST00000436374 ASF1AQ9Y294 204 aa17.26■□□□□ 0.35
CCDC144A-209ENST00000436374 SLCO1B1Q9Y6L6 691 aa17.26■□□□□ 0.35
CCDC144A-209ENST00000436374 FOXO6A8MYZ6 492 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 PIAS2O75928 621 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 IPO13O94829 963 aaKnown RBP17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 ANXA5P08758 320 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 CPA3P15088 417 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 CSRP1P21291 193 aaKnown RBP17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 GLRBP48167 497 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 RPIAP49247 311 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 NFKB2Q00653 900 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 DLG1Q12959 904 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 ABRQ12979 859 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 SLC14A1Q13336 389 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 SUZ12Q15022 739 aaKnown RBP17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 TSNQ15631 228 aaKnown RBP17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 SULT1C3Q6IMI6 304 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 SLC30A9Q6PML9 568 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 ZYG11AQ6WRX3 759 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 FAM83HQ6ZRV2 1179 aaPredicted RBP17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 ANKRD42Q8N9B4 389 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 DEFB124Q8NES8 71 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 LMX1AQ8TE12 382 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 DENND1AQ8TEH3 1009 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 GAREM1Q9H706 876 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 POT1Q9NUX5 634 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 TAAR2Q9P1P5 351 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 COPG2Q9UBF2 871 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 LNPEPQ9UIQ6 1025 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 ANGPTL2Q9UKU9 493 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 SNX11Q9Y5W9 270 aa17.25■□□□□ 0.35
CCDC144A-209ENST00000436374 NPEPPSL1A6NEC2 478 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 ZW10O43264 779 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 TOP3BO95985 862 aaKnown RBP17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 NEFHP12036 1026 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 CEACAM1P13688 526 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 GFAPP14136 432 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 CREB1P16220 341 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 PDHA2P29803 388 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 CCT8P50990 548 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 SHC2P98077 582 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 ARHGAP19Q14CB8 494 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 TGFBIQ15582 683 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 INAVAQ3KP66 663 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 SBSNQ6UWP8 590 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 NAPRTQ6XQN6 538 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 CDHR3Q6ZTQ4 885 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 SLC9B2Q86UD5 537 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 VRK3Q8IV63 474 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 TRIM48Q8IWZ4 208 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 KIRREL3Q8IZU9 778 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 SPATA6LQ8N4H0 392 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 ZNF548Q8NEK5 533 aaPredicted RBP17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 ARMC2Q8NEN0 867 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 SH3KBP1Q96B97 665 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 ZBTB9Q96C00 473 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 CXorf40BQ96DE9 158 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 C12orf66Q96MD2 445 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 ATOH8Q96SQ7 321 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 EVA1BQ9NVM1 165 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 DNAAF2Q9NVR5 837 aaKnown RBP17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 ARL15Q9NXU5 204 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 CD274Q9NZQ7 290 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 OGFRQ9NZT2 677 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 SPATA7Q9P0W8 599 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 TBC1D29Q9UFV1 150 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 WASF3Q9UPY6 502 aa17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 PCYT1BQ9Y5K3 369 aaPredicted RBP17.24■□□□□ 0.35
CCDC144A-209ENST00000436374 A0A1B0GTQ1 180 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 SUPT3HB4E1H0 165 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 STX16-NPEPL1H3BU86 382 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 CDC7O00311 574 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 STX16O14662 325 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 SCAMP1O15126 338 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 FFAR2O15552 330 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 SUPT3HO75486 399 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 C1orf105O95561 183 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 MTHFD1P11586 935 aaKnown RBP17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 XRCC1P18887 633 aaPredicted RBP17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 CCND1P24385 295 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 GRK2P25098 689 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 RPL10P27635 214 aaKnown RBP17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 SERPINB5P36952 375 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 ETV4P43268 484 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 SERPINB4P48594 390 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 PIK3CGP48736 1102 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 ALDH18A1P54886 795 aaKnown RBP17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 DNAJB13P59910 316 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 PPP1R3AQ16821 1122 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 HLA-BQ31612 363 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 IYDQ6PHW0 289 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 LAYNQ6UX15 382 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 PIP4P1Q86T03 277 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 NRROSQ86YC3 692 aa17.23■□□□□ 0.35
CCDC144A-209ENST00000436374 RASGRP3Q8IV61 690 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms