RNA–Protein interactions for RNA: ENST00000435759.6

PTPN7-203, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-203ENST00000435759 TDRKHQ9Y2W6 561 aaKnown RBP13.19□□□□□ -0.3
PTPN7-203ENST00000435759 SLC5A10A0PJK1 596 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 E7EQ34 232 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 MATN2O00339 956 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 KRT86O43790 486 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 CNOT3O75175 753 aaKnown RBP13.18□□□□□ -0.3
PTPN7-203ENST00000435759 FTCDO95954 541 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 CHRM5P08912 532 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-203ENST00000435759 PEBP1P30086 187 aaKnown RBP13.18□□□□□ -0.3
PTPN7-203ENST00000435759 OTX2P32243 289 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 CSE1LP55060 971 aaKnown RBP13.18□□□□□ -0.3
PTPN7-203ENST00000435759 NCF4Q15080 339 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 INPP5JQ15735 1006 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-203ENST00000435759 EIF2S3LQ2VIR3 472 aaKnown RBP13.18□□□□□ -0.3
PTPN7-203ENST00000435759 PLEKHN1Q494U1 663 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-203ENST00000435759 C2orf73Q8N5S3 287 aaPredicted RBP13.18□□□□□ -0.3
PTPN7-203ENST00000435759 GLIS1Q8NBF1 620 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 GALNT11Q8NCW6 608 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 OR52K1Q8NGK4 314 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 SLC35B2Q8TB61 432 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 ELMO1Q92556 727 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 ZNF778Q96MU6 729 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 SLC7A5P2Q9GIP4 190 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 LRRC40Q9H9A6 602 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 LRRC4CQ9HCJ2 640 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 LUC7LQ9NQ29 371 aaKnown RBP13.18□□□□□ -0.3
PTPN7-203ENST00000435759 IMPACTQ9P2X3 320 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 CIDEBQ9UHD4 219 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 AMFRQ9UKV5 643 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 ZNF451Q9Y4E5 1061 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 SEC16AO15027 2179 aa13.18□□□□□ -0.3
PTPN7-203ENST00000435759 SPTAN1Q13813 2472 aaKnown RBP13.17□□□□□ -0.3
PTPN7-203ENST00000435759 TCP11X1B4DZS4 312 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 AP2A2O94973 939 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 AP2A1O95782 977 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 ETS1P14921 441 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 MSNP26038 577 aaKnown RBP13.17□□□□□ -0.3
PTPN7-203ENST00000435759 FOXN2P32314 431 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 CETN2P41208 172 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 MRPL49Q13405 166 aaKnown RBP13.17□□□□□ -0.3
PTPN7-203ENST00000435759 SLC9A5Q14940 896 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 C4orf17Q53FE4 359 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 ZNF449Q6P9G9 518 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 VRK3Q8IV63 474 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 DNAJC22Q8N4W6 341 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 ZNF655Q8N720 491 aaPredicted RBP13.17□□□□□ -0.3
PTPN7-203ENST00000435759 EFCAB3Q8N7B9 438 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 C19orf47Q8N9M1 422 aaKnown RBP13.17□□□□□ -0.3
PTPN7-203ENST00000435759 OR13J1Q8NGT2 312 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 ATG4AQ8WYN0 398 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 HDAC10Q969S8 669 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 ETNK1Q9HBU6 452 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 DHCR7Q9UBM7 475 aaKnown RBP13.17□□□□□ -0.3
PTPN7-203ENST00000435759 CDYLQ9Y232 598 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 ASF1AQ9Y294 204 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 NOTCH2Q04721 2471 aa13.17□□□□□ -0.3
PTPN7-203ENST00000435759 IQCF5A8MTL0 148 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 LIN7AO14910 233 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-203ENST00000435759 MAP3K7O43318 606 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 OR2B3O76000 313 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 AGXTP21549 392 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 CCR7P32248 378 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 NSG1P42857 185 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 SEMA3AQ14563 771 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 KCTD19Q17RG1 926 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-203ENST00000435759 FHL5Q5TD97 284 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 SLC6A19Q695T7 634 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 MED25Q71SY5 747 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 ZNF534Q76KX8 674 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 PEX26Q7Z412 305 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 LDB1Q86U70 411 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-203ENST00000435759 TBC1D21Q8IYX1 336 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 TMEM102Q8N9M5 508 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-203ENST00000435759 TCTN2Q96GX1 697 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 CALR3Q96L12 384 aaKnown RBP13.16□□□□□ -0.3
PTPN7-203ENST00000435759 GBP5Q96PP8 586 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 PPP1R2P1Q96PQ5 205 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 SMAD5Q99717 465 aaKnown RBP13.16□□□□□ -0.3
PTPN7-203ENST00000435759 VPS37BQ9H9H4 285 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 ZBTB20Q9HC78 741 aaPredicted RBP13.16□□□□□ -0.3
PTPN7-203ENST00000435759 SLC22A11Q9NSA0 550 aa13.16□□□□□ -0.3
PTPN7-203ENST00000435759 PTRH2Q9Y3E5 179 aaKnown RBP13.16□□□□□ -0.3
PTPN7-203ENST00000435759 ISM1B1AKI9 464 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 PSMD3O43242 534 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 AGFG2O95081 481 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 GOT2P00505 430 aaKnown RBP13.15□□□□□ -0.3
PTPN7-203ENST00000435759 PTMAP06454 111 aaKnown RBP13.15□□□□□ -0.3
PTPN7-203ENST00000435759 SHMT2P34897 504 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 ITIH4Q14624 930 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 SSPNQ14714 243 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 PACS1Q6VY07 963 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 HOOK3Q86VS8 718 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 TMEM139Q8IV31 216 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 GPR135Q8IZ08 494 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 LINC01555Q8NAE3 123 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 TTC13Q8NBP0 860 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 OR5K2Q8NHB8 316 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 LKAAEAR1Q8TD35 194 aa13.15□□□□□ -0.3
PTPN7-203ENST00000435759 MRFAP1L1Q96HT8 127 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms