RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 ITFG1Q8TB96 612 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 ADAMTS16Q8TE57 1224 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 ASIC4Q96FT7 647 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 FBXL20Q96IG2 436 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 SUV39H2Q9H5I1 410 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 GORASP2Q9H8Y8 452 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 DEAF1O75398 565 aaPredicted RBP18.18■□□□□ 0.5
CLK1-205ENST00000434813 CLDN9O95484 217 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 EPORP19235 508 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 GGT5P36269 586 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 MAPKAPK3Q16644 382 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 ATP13A5Q4VNC0 1218 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 FAM98BQ52LJ0 330 aaKnown RBP18.18■□□□□ 0.5
CLK1-205ENST00000434813 ABRAXAS1Q6UWZ7 409 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 USP51Q70EK9 711 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 LRRC70Q7Z2Q7 622 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 ZNF548Q8NEK5 533 aaPredicted RBP18.18■□□□□ 0.5
CLK1-205ENST00000434813 OR2T12Q8NG77 320 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 TMIGD2Q96BF3 282 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 HIC2Q96JB3 615 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 ZFP14Q9HCL3 533 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 C1orf109Q9NX04 203 aa18.18■□□□□ 0.5
CLK1-205ENST00000434813 LEFTY2O00292 366 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 FGF18O76093 207 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 KRT6AP02538 564 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 FGBP02675 491 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 KRT6BP04259 564 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 ASLP04424 464 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 PGRP06401 933 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 CCR7P32248 378 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 KRT6CP48668 564 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 SEMG2Q02383 582 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 CYP4F3Q08477 520 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 PPIGQ13427 754 aaKnown RBP eCLIP18.17■□□□□ 0.51e-9■□□□□ 9.8
CLK1-205ENST00000434813 GBX1Q14549 363 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 PLA2G4EQ3MJ16 856 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 GGTA1PQ4G0N0 100 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 USP39Q53GS9 565 aaKnown RBP18.17■□□□□ 0.5
CLK1-205ENST00000434813 SPANXN4Q5MJ08 99 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 ZDHHC20Q5W0Z9 365 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 MSRB3Q8IXL7 192 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 TCAIMQ8N3R3 496 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 MAGEE2Q8TD90 523 aaPredicted RBP18.17■□□□□ 0.5
CLK1-205ENST00000434813 CPEB1Q9BZB8 566 aaKnown RBP18.17■□□□□ 0.5
CLK1-205ENST00000434813 SLC32A1Q9H598 525 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 NTN4Q9HB63 628 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 ARL15Q9NXU5 204 aa18.17■□□□□ 0.5
CLK1-205ENST00000434813 UPK1AO00322 258 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 TGM5O43548 720 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 SEC22BO75396 215 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 GMNNO75496 209 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 LRG1P02750 347 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 EN2P19622 333 aaPredicted RBP18.16■□□□□ 0.5
CLK1-205ENST00000434813 RPL10P27635 214 aaKnown RBP18.16■□□□□ 0.5
CLK1-205ENST00000434813 PCSK6P29122 969 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 HLA-FP30511 346 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 RPIAP49247 311 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 ADARB1P78563 741 aaKnown RBP18.16■□□□□ 0.5
CLK1-205ENST00000434813 PTSQ03393 145 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 SUSD1Q6UWL2 747 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 LPCAT2Q7L5N7 544 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 CMTM8Q8IZV2 173 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 SH3GL1Q99961 368 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 ACTR8Q9H981 624 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.16■□□□□ 0.5
CLK1-205ENST00000434813 PDE10AQ9Y233 779 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 AP3M1Q9Y2T2 418 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 HELZP42694 1942 aaKnown RBP18.16■□□□□ 0.5
CLK1-205ENST00000434813 H0YAE9 185 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 NRG2O14511 850 aaPredicted RBP18.16■□□□□ 0.5
CLK1-205ENST00000434813 C1SP09871 688 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 OR56A5P0C7T3 313 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 NFKBIAP25963 317 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 PLIN5Q00G26 463 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 CHRNB3Q05901 458 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 SGO1Q5FBB7 561 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 KRTCAP2Q8N6L1 136 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 OR52E4Q8NGH9 312 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 DNAJB8Q8NHS0 232 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 DTNBP1Q96EV8 351 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 SLC12A9Q9BXP2 914 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 UGT2B28Q9BY64 529 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 ACPTQ9BZG2 426 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 CEP44Q9C0F1 390 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 SLC25A37Q9NYZ2 338 aa18.16■□□□□ 0.5
CLK1-205ENST00000434813 TRBV5-3A0A0A0MS03 114 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 A0A1W2PRU2 124 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 NUAK1O60285 661 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 TRMUO75648 421 aaKnown RBP18.15■□□□□ 0.5
CLK1-205ENST00000434813 SNAP29O95721 258 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 CLIC3O95833 236 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 C8GP07360 202 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 PFKLP17858 780 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 AOAHP28039 575 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 FPGSQ05932 587 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 TBPL2Q6SJ96 375 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 UBE2R2Q712K3 238 aaPredicted RBP18.15■□□□□ 0.5
CLK1-205ENST00000434813 OFCC1Q8IZS5 231 aa18.15■□□□□ 0.5
CLK1-205ENST00000434813 ZNF641Q96N77 438 aaPredicted RBP18.15■□□□□ 0.5
CLK1-205ENST00000434813 ZBP1Q9H171 429 aa18.15■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms