RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 PKP2Q99959 881 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 SLC39A3Q9BRY0 314 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 TMEM79Q9BSE2 394 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 H2AFJQ9BTM1 129 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 SLC29A3Q9BZD2 475 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 SLC32A1Q9H598 525 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 ARMC1Q9NVT9 282 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 ELOVL2Q9NXB9 296 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 DEC1Q9P2X7 70 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 PCDHA9Q9Y5H5 950 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 TBC1D3BA6NDS4 549 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 PRRT4C9JH25 899 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 ANHXE9PGG2 379 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 NARSO43776 548 aaKnown RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 DNAJA2O60884 412 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 ULK1O75385 1050 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 CISD3P0C7P0 127 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 PIM1P11309 404 aaPredicted RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 JAK1P23458 1154 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 CCR7P32248 378 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 ZFP36L2P47974 494 aaKnown RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 ATXN3P54252 364 aaPredicted RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 UFM1P61960 85 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 B4GALNT1Q00973 533 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 INPP5AQ14642 412 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 SMAD2Q15796 467 aaKnown RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 AP5B1Q2VPB7 878 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 AASDHQ4L235 1098 aaPredicted RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 IER5LQ5T953 404 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 LCN8Q6JVE9 175 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 SCIMPQ6UWF3 145 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 LRRC70Q7Z2Q7 622 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 TRIM46Q7Z4K8 759 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 RAVER1Q8IY67 606 aaKnown RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 SLC44A3Q8N4M1 653 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 DCBLD1Q8N8Z6 715 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 CHST14Q8NCH0 376 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 WFIKKN2Q8TEU8 576 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 FRS2Q8WU20 508 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 MAGEB10Q96LZ2 347 aaPredicted RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 ZSCAN5AQ9BUG6 496 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 C1orf50Q9BV19 199 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 SPATA16Q9BXB7 569 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 SLC12A9Q9BXP2 914 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 FAM83DQ9H4H8 585 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 MTG2Q9H4K7 406 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 IL1RL2Q9HB29 575 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 PARVBQ9HBI1 364 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 DKK3Q9UBP4 350 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 TSR3Q9UJK0 312 aaKnown RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 FBXO10Q9UK96 956 aa11.68□□□□□ -0.54
CTCFL-209ENST00000433949 EIF3LQ9Y262 564 aaKnown RBP11.68□□□□□ -0.54
CTCFL-209ENST00000433949 F5P12259 2224 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 KANSL1LA0AUZ9 987 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 DPPA5A6NC42 116 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 UPK3BL1B0FP48 263 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 UPK3BL2E5RIL1 263 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 ARNTLO00327 626 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 HOXC11O43248 304 aaPredicted RBP11.67□□□□□ -0.54
CTCFL-209ENST00000433949 RNASEH2AO75792 299 aaKnown RBP11.67□□□□□ -0.54
CTCFL-209ENST00000433949 BMP1P13497 986 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 AKT1P31749 480 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 AP1S2P56377 157 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 EEFSECP57772 596 aaKnown RBP11.67□□□□□ -0.54
CTCFL-209ENST00000433949 FOLH1Q04609 750 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 ABRAXAS2Q15018 415 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 C18orf21Q32NC0 220 aaPredicted RBP11.67□□□□□ -0.54
CTCFL-209ENST00000433949 ITPRIPL2Q3MIP1 535 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 PTRH1Q86Y79 214 aaKnown RBP11.67□□□□□ -0.54
CTCFL-209ENST00000433949 GLB1L3Q8NCI6 653 aaPredicted RBP11.67□□□□□ -0.54
CTCFL-209ENST00000433949 CSGALNACT1Q8TDX6 532 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 EME1Q96AY2 570 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 ALG2Q9H553 416 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 ARL15Q9NXU5 204 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 MYO10Q9HD67 2058 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 HNRNPRO43390 633 aaKnown RBP11.67□□□□□ -0.54
CTCFL-209ENST00000433949 LEFTY1O75610 366 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 CLDN9O95484 217 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 KRT6AP02538 564 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 FTH1P02794 183 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 KRT6BP04259 564 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 CYP2A7P20853 494 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 GRIA3P42263 894 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 KRT6CP48668 564 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 HTR6P50406 440 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 TLR1Q15399 786 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 LEXMQ3ZCV2 418 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 GGTA1PQ4G0N0 100 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 CYP20A1Q6UW02 462 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 CYP2R1Q6VVX0 501 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 UBE2R2Q712K3 238 aaPredicted RBP11.67□□□□□ -0.54
CTCFL-209ENST00000433949 ETFBKMTQ8IXQ9 262 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 FAM9CQ8IZT9 166 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 MARVELD2Q8N4S9 558 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 TRAM1L1Q8N609 369 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 ASZ1Q8WWH4 475 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 TMEM125Q96AQ2 219 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 VPS33AQ96AX1 596 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 TEX37Q96LM6 180 aa11.67□□□□□ -0.54
CTCFL-209ENST00000433949 ZBTB18Q99592 522 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms