RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 MDH1BQ5I0G3 518 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 INTS11Q5TA45 600 aaKnown RBP3□□□□□ -1.93
PTPN4-205ENST00000433888 NCEH1Q6PIU2 408 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 ADIPOR2Q86V24 386 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 KIRREL3Q8IZU9 778 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 OR10G8Q8NGN5 311 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 DGCR6LQ9BY27 220 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 PDCL3Q9H2J4 239 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 GPR83Q9NYM4 423 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 EHD2Q9NZN4 543 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 MUTYHQ9UIF7 546 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 NENFQ9UMX5 172 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 MTMR6Q9Y217 621 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 LAS1LQ9Y4W2 734 aaKnown RBP3□□□□□ -1.93
PTPN4-205ENST00000433888 RPS6KL1Q9Y6S9 549 aa3□□□□□ -1.93
PTPN4-205ENST00000433888 C22orf31O95567 290 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 CDH2P19022 906 aaPredicted RBP2.99□□□□□ -1.93
PTPN4-205ENST00000433888 HERV-K104P61576 105 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 CX3CL1P78423 397 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 DDX10Q13206 875 aaKnown RBP2.99□□□□□ -1.93
PTPN4-205ENST00000433888 MED22Q15528 200 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 TBC1D1Q86TI0 1168 aaPredicted RBP2.99□□□□□ -1.93
PTPN4-205ENST00000433888 POM121L12Q8N7R1 296 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 ERLEC1Q96DZ1 483 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 BARD1Q99728 777 aaKnown RBP2.99□□□□□ -1.93
PTPN4-205ENST00000433888 SLC26A6Q9BXS9 759 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 JMJD4Q9H9V9 463 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 GNB4Q9HAV0 340 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 UBN1Q9NPG3 1134 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 MTUS1Q9ULD2 1270 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 EXO1Q9UQ84 846 aaKnown RBP2.99□□□□□ -1.93
PTPN4-205ENST00000433888 ATRXP46100 2492 aa2.99□□□□□ -1.93
PTPN4-205ENST00000433888 A0A1W2PR77 199 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 GAPDHSO14556 408 aaPredicted RBP2.98□□□□□ -1.93
PTPN4-205ENST00000433888 TBX18O95935 607 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 DMPKQ09013 629 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 PLA2G7Q13093 441 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 ASTE1Q2TB18 679 aaPredicted RBP2.98□□□□□ -1.93
PTPN4-205ENST00000433888 C1orf122Q6ZSJ8 110 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 ADGRA1Q86SQ6 560 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 FAM9BQ8IZU0 186 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 TMTC2Q8N394 836 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 NIPA2Q8N8Q9 360 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 GOLGA6L2Q8N9W4 650 aaPredicted RBP2.98□□□□□ -1.93
PTPN4-205ENST00000433888 OR13J1Q8NGT2 312 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 MIPOL1Q8TD10 442 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 ARHGAP45Q92619 1136 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 SEC62Q99442 399 aaKnown RBP2.98□□□□□ -1.93
PTPN4-205ENST00000433888 C16orf70Q9BSU1 422 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 RPP25Q9BUL9 199 aaKnown RBP2.98□□□□□ -1.93
PTPN4-205ENST00000433888 CPVLQ9H3G5 476 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 AMACRQ9UHK6 382 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 GRID1Q9ULK0 1009 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 CMAHPQ9Y471 501 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 PCDHGA5Q9Y5G8 931 aa2.98□□□□□ -1.93
PTPN4-205ENST00000433888 RALGAPA1Q6GYQ0 2036 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 A6NCN8 305 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 LIPT2A6NK58 231 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 A8MZ25 164 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 HMGB1P1B2RPK0 211 aaPredicted RBP2.97□□□□□ -1.93
PTPN4-205ENST00000433888 MAGEC1O60732 1142 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 RNASEH2AO75792 299 aaKnown RBP2.97□□□□□ -1.93
PTPN4-205ENST00000433888 IGHV4-31P0DP07 118 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 CCR9P51686 369 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 SNRPEP62304 92 aaKnown RBP2.97□□□□□ -1.93
PTPN4-205ENST00000433888 MPP1Q00013 466 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 MELKQ14680 651 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 ZSCAN23Q3MJ62 389 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 MOGAT2Q3SYC2 334 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 XKR3Q5GH77 459 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 LCE1CQ5T751 118 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 LCE1BQ5T7P3 118 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 GKAP1Q5VSY0 366 aaPredicted RBP2.97□□□□□ -1.93
PTPN4-205ENST00000433888 CCDC30Q5VVM6 783 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 SLC25A47Q6Q0C1 308 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 BTN2A1Q7KYR7 527 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 MARCH9Q86YJ5 346 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 TRIML1Q8N9V2 468 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 NAXEQ8NCW5 288 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 IL17REQ8NFR9 667 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 SMAP2Q8WU79 429 aaPredicted RBP2.97□□□□□ -1.93
PTPN4-205ENST00000433888 RFFLQ8WZ73 363 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 MTERF3Q96E29 417 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 GAL3ST4Q96RP7 486 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 PPIL3Q9H2H8 161 aaKnown RBP2.97□□□□□ -1.93
PTPN4-205ENST00000433888 PLK3Q9H4B4 646 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 SPHK2Q9NRA0 654 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 RHCGQ9UBD6 479 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 SWAP70Q9UH65 585 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 NRBP1Q9UHY1 535 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 TUBE1Q9UJT0 475 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 KAT6BQ8WYB5 2073 aa2.97□□□□□ -1.93
PTPN4-205ENST00000433888 A0A1B0GVC2 190 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 PRLRP16471 622 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 PRKACGP22612 351 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 TMEM50BP56557 158 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 CYCSP99999 105 aaKnown RBP2.96□□□□□ -1.94
PTPN4-205ENST00000433888 RNF212Q495C1 297 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 SEL1L3Q68CR1 1132 aa2.96□□□□□ -1.94
PTPN4-205ENST00000433888 PCGF5Q86SE9 256 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms