RNA–Protein interactions for RNA: ENST00000431889.6

SMARCE1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2 BASIC

Gene SMARCE1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-205ENST00000431889 PITPNM3Q9BZ71 974 aa13.78□□□□□ -0.2
SMARCE1-205ENST00000431889 TFB2MQ9H5Q4 396 aaKnown RBP13.78□□□□□ -0.2
SMARCE1-205ENST00000431889 LRRC4CQ9HCJ2 640 aa13.78□□□□□ -0.2
SMARCE1-205ENST00000431889 LATS2Q9NRM7 1088 aa13.78□□□□□ -0.2
SMARCE1-205ENST00000431889 TSR3Q9UJK0 312 aaKnown RBP13.78□□□□□ -0.2
SMARCE1-205ENST00000431889 AMFRQ9UKV5 643 aa13.78□□□□□ -0.2
SMARCE1-205ENST00000431889 EFR3BQ9Y2G0 817 aa13.78□□□□□ -0.2
SMARCE1-205ENST00000431889 USP9XQ93008 2570 aaPredicted RBP13.78□□□□□ -0.2
SMARCE1-205ENST00000431889 ISM1B1AKI9 464 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 BHMG1C9JSJ3 638 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 OR2B3O76000 313 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 AGFG2O95081 481 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 RECKO95980 971 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 GP1BBP13224 206 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 PEBP1P30086 187 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 CETN2P41208 172 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 VAV2P52735 878 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 SNX1Q13596 522 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 SEMA3AQ14563 771 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 NCF4Q15080 339 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 SYTL3Q4VX76 610 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 JMJD6Q6NYC1 403 aaPredicted RBP13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 VRK3Q8IV63 474 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 RBMXL3Q8N7X1 1067 aaKnown RBP13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 Q8NA96 180 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 STYXQ8WUJ0 223 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 HDAC10Q969S8 669 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 IL17FQ96PD4 163 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 ALS2CR12Q96Q35 445 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 PANX2Q96RD6 677 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 MVB12BQ9H7P6 319 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 LRRC40Q9H9A6 602 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 VPS37BQ9H9H4 285 aa13.77□□□□□ -0.21
SMARCE1-205ENST00000431889 CNOT3O75175 753 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 IPO7O95373 1038 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 AP2A1O95782 977 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 CHRM5P08912 532 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 RAB40ALP0C0E4 278 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 FOXN2P32314 431 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 INPP5JQ15735 1006 aaPredicted RBP13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 ZNF449Q6P9G9 518 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 TMTC1Q8IUR5 882 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 KRT222Q8N1A0 295 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 DTWD1Q8N5C7 304 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 DNAAF3Q8N9W5 541 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 FLVCR1-AS1Q8TAF5 88 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 HEXDCQ8WVB3 486 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 LRFN5Q96NI6 719 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 MLXIPLQ9NP71 852 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 CASS4Q9NQ75 786 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 PTRH2Q9Y3E5 179 aaKnown RBP13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 MAP4K5Q9Y4K4 846 aa13.76□□□□□ -0.21
SMARCE1-205ENST00000431889 KLHL33A6NCF5 533 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 GOLGA6L9A6NEM1 432 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 MROH6A6NGR9 719 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 TCP11X1B4DZS4 312 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 H7C0S8 307 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 MAP3K7O43318 606 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 SORBS2O94875 1100 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 GOT2P00505 430 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 IFNB1P01574 187 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 ACADLP28330 430 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 GRIA3P42263 894 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 CD151P48509 253 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 TERF1P54274 439 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 KLF1Q13351 362 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 C4orf17Q53FE4 359 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 ZNF385CQ66K41 422 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 SLC6A19Q695T7 634 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 SHISA6Q6ZSJ9 500 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 SPNS2Q8IVW8 549 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 KLHDC8BQ8IXV7 354 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 GPR135Q8IZ08 494 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 METTL27Q8N6F8 245 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 OR13J1Q8NGT2 312 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 C1orf54Q8WWF1 131 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 SEC14L1Q92503 715 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 ETNK1Q9HBU6 452 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 ZBTB20Q9HC78 741 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 SLAMF7Q9NQ25 335 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 GPR83Q9NYM4 423 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 RUVBL2Q9Y230 463 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 PCDHGA9Q9Y5G4 932 aaKnown RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 CAPN6Q9Y6Q1 641 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 SEC16AO15027 2179 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 ICE1Q9Y2F5 2266 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 USP9YO00507 2555 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 C9J4A7 227 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 MATN2O00339 956 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 KLF7O75840 302 aaPredicted RBP13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 ZSCAN5DPP0CG00 497 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 AGXTP21549 392 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 ALAS2P22557 587 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 CCR7P32248 378 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 NSG1P42857 185 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 HSPA14Q0VDF9 509 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 FHL5Q5TD97 284 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 PPP1R21Q6ZMI0 780 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 CARFQ8N187 725 aa13.75□□□□□ -0.21
SMARCE1-205ENST00000431889 UBL4BQ8N7F7 174 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms