RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 PDGFRAP16234 1089 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 GNAZP19086 355 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 CBLP22681 906 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 OAS2P29728 719 aaKnown RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 PEX5P50542 639 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 THOP1P52888 689 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 MAPK12P53778 367 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 UBASH3AP57075 661 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 PTENP60484 403 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 MFAP5Q13361 173 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SNTA1Q13424 505 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLMAPQ14BN4 828 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 ZNF260Q3ZCT1 412 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 MDH1BQ5I0G3 518 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SUSD4Q5VX71 490 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 TXNRD3NBQ6F5E7 133 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 OR7E24Q6IFN5 339 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 MFSD12Q6NUT3 480 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 PACS1Q6VY07 963 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 IL17RELQ6ZVW7 336 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 OTOAQ7RTW8 1153 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 NUP54Q7Z3B4 507 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 FAM219AQ8IW50 185 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 ADHFE1Q8IWW8 467 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 GPALPP1Q8IXQ4 340 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 MUC20Q8N307 709 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 ATAD1Q8NBU5 361 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 OLIG1Q8TAK6 271 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 RNF128Q8TEB7 428 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SSMEM1Q8WWF3 244 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 RAD54LQ92698 747 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 MTERF3Q96E29 417 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 ADGRG7Q96K78 797 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SFXN2Q96NB2 322 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 NTPCRQ9BSD7 190 aaKnown RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 KATNB1Q9BVA0 655 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SEZ6LQ9BYH1 1024 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SLC29A3Q9BZD2 475 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 DDX31Q9H8H2 851 aaKnown RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 COPS7BQ9H9Q2 264 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SERINC1Q9NRX5 453 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 B3GAT1Q9P2W7 334 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 POLLQ9UGP5 575 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 RALYQ9UKM9 306 aaKnown RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SNX7Q9UNH6 387 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 VDAC3Q9Y277 283 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 KCNK7Q9Y2U2 307 aa2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 SPIN1Q9Y657 262 aaPredicted RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 TARBP1Q13395 1621 aaKnown RBP2.97□□□□□ -1.93
HMGB1P27-201ENST00000431429 DOCK7Q96N67 2140 aa2.96□□□□□ -1.93
HMGB1P27-201ENST00000431429 PTPRGP23470 1445 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 IGHV4OR15-8A0A075B7B6 117 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 A0A0U1RQK1 487 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 MED19A0JLT2 244 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 ZNF320A2RRD8 509 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 HYKKA2RU49 373 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 ASPDHA6ND91 283 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 OOEPA6NGQ2 149 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 E9PI62 339 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 TULP2O00295 520 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 AP5Z1O43299 807 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 ATP6AP2O75787 350 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 GOSR1O95249 250 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 BAG4O95429 457 aaKnown RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 LIPFP07098 398 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 ACAA1P09110 424 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 PLA2G4BP0C869 781 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SAGP10523 405 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 HAPLN1P10915 354 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 EEF2P13639 858 aaKnown RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 CRKLP46109 303 aaKnown RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 FUT6P51993 359 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 MLLT10P55197 1068 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 TPD52P55327 224 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 DSCR9P59020 149 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 NANOS2P60321 138 aaKnown RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 DLK1P80370 383 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 GAGE5Q13069 117 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 GAGE6Q13070 117 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 CUL3Q13618 768 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 PTK6Q13882 451 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 RRS1Q15050 365 aaKnown RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 NPTX1Q15818 432 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 ASIC2Q16515 512 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 CA9Q16790 459 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 LBHQ53QV2 105 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 NHSL2Q5HYW2 709 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SPDYCQ5MJ68 293 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 STXBP5Q5T5C0 1151 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SHEQ5VZ18 495 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 C9orf57Q5W0N0 161 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 MOXD1Q6UVY6 613 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 C11orf57Q6ZUT1 292 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 C16orf82Q7Z2V1 217 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 ARMC9Q7Z3E5 817 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 PIWIL4Q7Z3Z4 852 aaKnown RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 NUDT13Q86X67 352 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SNX32Q86XE0 403 aa2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SPATA2LQ8IUW3 424 aaPredicted RBP2.96□□□□□ -1.94
HMGB1P27-201ENST00000431429 SIX6OS1Q8N1H7 587 aa2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms