RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 ZNF669Q96BR6 464 aaPredicted RBP9.85□□□□□ -0.83
ATG4B-212ENST00000430617 AHCYL2Q96HN2 611 aaKnown RBP9.85□□□□□ -0.83
ATG4B-212ENST00000430617 ELMO2Q96JJ3 720 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 ZNF778Q96MU6 729 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 SMIM14Q96QK8 99 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 BARD1Q99728 777 aaKnown RBP9.85□□□□□ -0.83
ATG4B-212ENST00000430617 DHRS4Q9BTZ2 278 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 GSDMCQ9BYG8 508 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 VPS37BQ9H9H4 285 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 PCDH12Q9NPG4 1184 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 SMYD2Q9NRG4 433 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 MOCS1Q9NZB8 636 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 SAMD15Q9P1V8 674 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 FETUBQ9UGM5 382 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 ANKRD12Q6UB98 2062 aa9.85□□□□□ -0.83
ATG4B-212ENST00000430617 NCOA6Q14686 2063 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 A0A0J9YYE9 177 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 FAM159BA6NKW6 160 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 PRICKLE3O43900 615 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 NADKO95544 446 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 TRBC1P01850 177 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 POLBP06746 335 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 HOXC4P09017 264 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 KELP23276 732 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 ADRA1DP25100 572 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 ARNTP27540 789 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 NMBRP28336 390 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 PTGER4P35408 488 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 MMP12P39900 470 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 GNPDA1P46926 289 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 PER3P56645 1201 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 SH3BP2P78314 561 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 ELP6Q0PNE2 266 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 ILF3Q12906 894 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 ANKRD20A4Q4UJ75 823 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 TSTD2Q5T7W7 516 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 KIAA0930Q6ICG6 404 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 CASC4Q6P4E1 433 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 CYS1Q717R9 158 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 PALM2Q8IXS6 379 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 TTC30BQ8N4P2 665 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 OR13J1Q8NGT2 312 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 OR10G6Q8NH81 332 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 EPS8L3Q8TE67 593 aaKnown RBP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 THAP4Q8WY91 577 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 PEX13Q92968 403 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 MFSD3Q96ES6 412 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 CERS2Q96G23 380 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 ZNF641Q96N77 438 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 MCCC1Q96RQ3 725 aaPredicted RBP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 LYSMD1Q96S90 227 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 SLC38A3Q99624 504 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 ADGRE3Q9BY15 652 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 CHRAC1Q9NRG0 131 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 FAM53CQ9NYF3 392 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP9.84□□□□□ -0.83
ATG4B-212ENST00000430617 COPG2Q9UBF2 871 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 RIMKLBQ9ULI2 386 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 SUFUQ9UMX1 484 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 OSGIN2Q9Y236 505 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 PPIL1Q9Y3C6 166 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 ZNF711Q9Y462 761 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 PCDHGB7Q9Y5F8 929 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 FAM169AQ9Y6X4 670 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 SEC16AO15027 2179 aa9.84□□□□□ -0.83
ATG4B-212ENST00000430617 PRRC2AP48634 2157 aaKnown RBP9.83□□□□□ -0.84
ATG4B-212ENST00000430617 EXOC1LA0A1B0GW35 172 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 A0A1W2PQ67 120 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 MAGEB16A2A368 324 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 A6NL46 340 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 ANKRD66B4E2M5 251 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 RECQL5O94762 991 aaPredicted RBP9.83□□□□□ -0.84
ATG4B-212ENST00000430617 TIAF1O95411 115 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 EML2O95834 649 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 IVLP07476 585 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 PIRTP0C851 137 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 FASLGP48023 281 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 ARCN1P48444 511 aaKnown RBP9.83□□□□□ -0.84
ATG4B-212ENST00000430617 POLD2P49005 469 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 RAD51Q06609 339 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 RAPSNQ13702 412 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 PTPRRQ15256 657 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 RASA2Q15283 850 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 TAF1AQ15573 450 aaPredicted RBP9.83□□□□□ -0.84
ATG4B-212ENST00000430617 UGP2Q16851 508 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 KLHL38Q2WGJ6 581 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 KBTBD12Q3ZCT8 623 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 CEP85LQ5SZL2 805 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 FAM199XQ6PEV8 388 aaPredicted RBP9.83□□□□□ -0.84
ATG4B-212ENST00000430617 CES3Q6UWW8 571 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 C3orf62Q6ZUJ4 267 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 MARK2Q7KZI7 788 aaKnown RBP9.83□□□□□ -0.84
ATG4B-212ENST00000430617 TDRPQ86YL5 185 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 ST6GALNAC3Q8NDV1 305 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 BRSK1Q8TDC3 778 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 BLOC1S5Q8TDH9 187 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 SLC37A2Q8TED4 501 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 PAFAH2Q99487 392 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 ACBD3Q9H3P7 528 aa9.83□□□□□ -0.84
ATG4B-212ENST00000430617 SUV39H2Q9H5I1 410 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms