RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 CAMK1Q14012 370 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 PTPRCAPQ14761 206 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 NR6A1Q15406 480 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 AP5B1Q2VPB7 878 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 PLA2G4EQ3MJ16 856 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 INO80DQ53TQ3 878 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ZC3H12BQ5HYM0 836 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 CTSL3PQ5NE16 218 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 GPR107Q5VW38 600 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ATG9BQ674R7 924 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 SULT1C3Q6IMI6 304 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 GTF2H2CQ6P1K8 395 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 NCEH1Q6PIU2 408 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 IL27RAQ6UWB1 636 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 LIN28BQ6ZN17 250 aaKnown RBP eCLIP8.53□□□□□ -1.042e-8■■□□□ 11.7
GABPB1-205ENST00000429662 ANKS3Q6ZW76 656 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 MILR1Q7Z6M3 343 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 METTL3Q86U44 580 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF280BQ86YH2 543 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 RBM12BQ8IXT5 1001 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 CLEC4FQ8N1N0 589 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 TTC30BQ8N4P2 665 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 CDYL2Q8N8U2 506 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 TMEM105Q8N8V8 129 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 SIDT2Q8NBJ9 832 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ATAD1Q8NBU5 361 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 LPCAT1Q8NF37 534 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 PJA1Q8NG27 643 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 OR2T11Q8NH01 316 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 UBTD2Q8WUN7 234 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 EEF1AKMT1Q8WVE0 214 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 TRUB1Q8WWH5 349 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 SLC13A3Q8WWT9 602 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ITFG2Q969R8 447 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 TBC1D20Q96BZ9 403 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 FBXL20Q96IG2 436 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 COX4I2Q96KJ9 171 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 TEX37Q96LM6 180 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 MAGEB10Q96LZ2 347 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 COG8Q96MW5 612 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 SPON2Q9BUD6 331 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 FAM126AQ9BYI3 521 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 SLC29A3Q9BZD2 475 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 NSUN3Q9H649 340 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 DNAAF2Q9NVR5 837 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 TMEM161AQ9NX61 479 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 CLDND1Q9NY35 253 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 GMPR2Q9P2T1 348 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 TRPS1Q9UHF7 1281 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 EIF2B4Q9UI10 523 aaKnown RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ZNF225Q9UK10 706 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 IKZF3Q9UKT9 509 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 OARD1Q9Y530 152 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ORC6Q9Y5N6 252 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 ZFP37Q9Y6Q3 630 aaPredicted RBP8.53□□□□□ -1.04
GABPB1-205ENST00000429662 MYLKQ15746 1914 aa8.53□□□□□ -1.04
GABPB1-205ENST00000429662 MIA3Q5JRA6 1907 aa8.52□□□□□ -1.04
GABPB1-205ENST00000429662 NBEAQ8NFP9 2946 aa8.52□□□□□ -1.04
GABPB1-205ENST00000429662 A0A0D9SEW6 157 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ELOVL7A1L3X0 281 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 G3V2T6 193 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ANKRD28O15084 1053 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ST8SIA5O15466 376 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 NIPSNAP2O75323 286 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ERN1O75460 977 aaKnown RBP8.52□□□□□ -1.05
GABPB1-205ENST00000429662 RECQL5O94762 991 aaPredicted RBP8.52□□□□□ -1.05
GABPB1-205ENST00000429662 SNAP29O95721 258 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 BCL10O95999 233 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 PRLP01236 227 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ALDH2P05091 517 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ALPLP05186 524 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CAPN1P07384 714 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 RETP07949 1114 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 PIRTP0C851 137 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 EBLN1P0CF75 366 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CBSLP0DN79 551 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 G6PDP11413 515 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 IMPDH2P12268 514 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 NCK1P16333 377 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 UGT1A6P19224 532 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 EEF1B2P24534 225 aaKnown RBP8.52□□□□□ -1.05
GABPB1-205ENST00000429662 IL12AP29459 219 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CBSP35520 551 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 MTHFRP42898 656 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 MAPK8P45983 427 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 GNPDA1P46926 289 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 PPP3CCP48454 512 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 TUFMP49411 452 aaKnown RBP8.52□□□□□ -1.05
GABPB1-205ENST00000429662 ENTPD1P49961 510 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 AGTR2P50052 363 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CLCN7P51798 805 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 HK3P52790 923 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 RAD23AP54725 363 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 TPD52P55327 224 aaPredicted RBP8.52□□□□□ -1.05
GABPB1-205ENST00000429662 OR4D2P58180 307 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 C16orf72Q14CZ0 275 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CLLU1OSQ5K130 101 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 FAM171A1Q5VUB5 890 aa8.52□□□□□ -1.05
GABPB1-205ENST00000429662 PTRHD1Q6GMV3 140 aaKnown RBP8.52□□□□□ -1.05
GABPB1-205ENST00000429662 CNKSR3Q6P9H4 555 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms