RNA–Protein interactions for RNA: ENST00000427785.5

RFC4-206, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 485 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-206ENST00000427785 PKP4Q99569 1192 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 HIST1H2AJQ99878 128 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 H2AFJQ9BTM1 129 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 TNFRSF12AQ9NP84 129 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 PRDM8Q9NQV8 689 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 IMP3Q9NV31 184 aaKnown RBP11.76□□□□□ -0.53
RFC4-206ENST00000427785 DCTN4Q9UJW0 460 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 PTBP2Q9UKA9 531 aaKnown RBP11.76□□□□□ -0.53
RFC4-206ENST00000427785 RAP2CQ9Y3L5 183 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 RALGAPA1Q6GYQ0 2036 aa11.76□□□□□ -0.53
RFC4-206ENST00000427785 CCDC163A0A0D9SF12 145 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 A0A1B0GTL3 188 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 KLHL33A6NCF5 533 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 OR52A4PA6NMU1 304 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 E2F3O00716 465 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 PPP6CO00743 305 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 UBFD1O14562 309 aaKnown RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 EML2O95834 649 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 IDSP22304 550 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 ITPKAP23677 461 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 CD38P28907 300 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 IMPA1P29218 277 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 DHPSP49366 369 aaPredicted RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 RACK1P63244 317 aaKnown RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 CLCQ05315 142 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 PRKAA1Q13131 559 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 PCBP2Q15366 365 aaKnown RBP eCLIP11.75□□□□□ -0.53
RFC4-206ENST00000427785 SH2D4BQ5SQS7 431 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 GKAP1Q5VSY0 366 aaPredicted RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 LPCAT2Q7L5N7 544 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 MAVSQ7Z434 540 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 LONP2Q86WA8 852 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 DCUN1D3Q8IWE4 304 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 TEX9Q8N6V9 391 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 DCBLD1Q8N8Z6 715 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 LMNTD1Q8N9Z9 388 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 MFSD2AQ8NA29 543 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 PPFIBP2Q8ND30 876 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 PHC3Q8NDX5 983 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 GAB3Q8WWW8 586 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 TFGQ92734 400 aaPredicted RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 FBXL8Q96CD0 374 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 CNDP1Q96KN2 507 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 IL17FQ96PD4 163 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 INSM2Q96T92 566 aaPredicted RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 C1QTNF3Q9BXJ4 246 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 TRIM55Q9BYV6 548 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 ATG10Q9H0Y0 220 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 DUSP15Q9H1R2 295 aaPredicted RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 ZBTB26Q9HCK0 441 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 MID1IP1Q9NPA3 183 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 DNAJC28Q9NX36 388 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 SCHIP1Q9P0W5 487 aaPredicted RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 STOX2Q9P2F5 926 aaPredicted RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 OPTCQ9UBM4 332 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 TBC1D29Q9UFV1 150 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 KLF15Q9UIH9 416 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 ACSL5Q9ULC5 683 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 TDRKHQ9Y2W6 561 aaKnown RBP11.75□□□□□ -0.53
RFC4-206ENST00000427785 DGKBQ9Y6T7 804 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 BDP1A6H8Y1 2624 aa11.75□□□□□ -0.53
RFC4-206ENST00000427785 A0A0G2JND7 137 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 MYO1CO00159 1063 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 SKAP2O75563 359 aaPredicted RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 WDR47O94967 919 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 TNFP01375 233 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 ARL1P40616 181 aaPredicted RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 ILF3Q12906 894 aaKnown RBP eCLIP11.74□□□□□ -0.53
RFC4-206ENST00000427785 LCP2Q13094 533 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 PRKG2Q13237 762 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 TSTA3Q13630 321 aaPredicted RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 GTF2H2Q13888 395 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 LRP8Q14114 963 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 CLCA4Q14CN2 919 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 PDCD2Q16342 344 aaPredicted RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 ZXDCQ2QGD7 858 aaPredicted RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 PTCHD3Q3KNS1 767 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 CDKL4Q5MAI5 379 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 WDR45BQ5MNZ6 344 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 LYSMD4Q5XG99 296 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 PMS2CLQ68D20 193 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 CLEC6AQ6EIG7 209 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 CAPRIN2Q6IMN6 1127 aaKnown RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 GTF2H2CQ6P1K8 395 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 LRRC70Q7Z2Q7 622 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 PIGWQ7Z7B1 504 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 SPATS2Q86XZ4 545 aaKnown RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 NRROSQ86YC3 692 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 CACNA2D3Q8IZS8 1091 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 TCAIMQ8N3R3 496 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 FBXL6Q8N531 539 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 SNX31Q8N9S9 440 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 FBXO15Q8NCQ5 510 aaPredicted RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 CCDC197Q8NCU1 140 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 C1orf216Q8TAB5 229 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 FAM174AQ8TBP5 190 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 PIWIL2Q8TC59 973 aaKnown RBP11.74□□□□□ -0.53
RFC4-206ENST00000427785 AGAP11Q8TF27 550 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 PYCR2Q96C36 320 aa11.74□□□□□ -0.53
RFC4-206ENST00000427785 GRAMD1AQ96CP6 724 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms