RNA–Protein interactions for RNA: ENST00000427299.6

LINC00458-202, long intergenic non-protein coding RNA 458, humanhuman

TSL 1 (best) BASIC

Gene LINC00458, Length 1,030 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00458-202ENST00000427299 PEX3P56589 373 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 TAS2R50P59544 299 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 IRX1P78414 480 aaPredicted RBP5.03□□□□□ -1.6
LINC00458-202ENST00000427299 BNIP1Q12981 228 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 TNFAIP1Q13829 316 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 CBFBQ13951 182 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 NAA25Q14CX7 972 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 PDK4Q16654 411 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 CTXN3Q4LDR2 81 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 FAM133BQ5BKY9 247 aaKnown RBP5.03□□□□□ -1.6
LINC00458-202ENST00000427299 XKR9Q5GH70 373 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 MON1BQ7L1V2 547 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 GALNT5Q7Z7M9 940 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 EXOC3L1Q86VI1 746 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 SLC47A2Q86VL8 602 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 VSIG1Q86XK7 387 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 RFX6Q8HWS3 928 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 MCOLN2Q8IZK6 566 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 DAW1Q8N136 415 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 TMEM199Q8N511 208 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 ANKRD52Q8NB46 1076 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 CEP70Q8NHQ1 597 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 MGARPQ8TDB4 240 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 CLEC4CQ8WTT0 213 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 FAM151AQ8WW52 585 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 TREX2Q9BQ50 279 aaPredicted RBP5.03□□□□□ -1.6
LINC00458-202ENST00000427299 FRMD8Q9BZ67 464 aaPredicted RBP5.03□□□□□ -1.6
LINC00458-202ENST00000427299 OSBPL8Q9BZF1 889 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 DBNDD1Q9H9R9 158 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 MOV10Q9HCE1 1003 aaKnown RBP5.03□□□□□ -1.6
LINC00458-202ENST00000427299 PREBQ9HCU5 417 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 POLD4Q9HCU8 107 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 PARVAQ9NVD7 372 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 TBX20Q9UMR3 447 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 TTLL3Q9Y4R7 772 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 UBIAD1Q9Y5Z9 338 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 OTOFQ9HC10 1997 aa5.03□□□□□ -1.6
LINC00458-202ENST00000427299 TSC2P49815 1807 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 UMODL1Q5DID0 1318 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 MROH7Q68CQ1 1323 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 PAPPA2Q9BXP8 1791 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 DICER1Q9UPY3 1922 aaKnown RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 A0A1W2PPH5 198 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 PGPEP1LA6NFU8 196 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 AGAP5A6NIR3 686 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 C3orf70A6NLC5 250 aaPredicted RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 H0YIN7 160 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 STX16-NPEPL1H3BU86 382 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 DDX39AO00148 427 aaKnown RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 STX16O14662 325 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 SLC16A4O15374 487 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 MAGEB2O15479 319 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 EXTL3O43909 919 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF189O75820 626 aaPredicted RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 PIGRP01833 764 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 CSF1P09603 554 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 UNGP13051 313 aaPredicted RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 ST6GAL1P15907 406 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 CHRNB2P17787 502 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 TFEBP19484 476 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 GRK5P34947 590 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 HOXD12P35452 270 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF84P51523 738 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 CCNG1P51959 295 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 OAZ1P54368 228 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 MTA1Q13330 715 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 SLC12A1Q13621 1099 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 PTGR1Q14914 329 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 PSMD6Q15008 389 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 E2F5Q15329 346 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 WASHC2DQ5SRD0 308 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 C6orf163Q5TEZ5 329 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 HHATQ5VTY9 493 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 CAPRIN2Q6IMN6 1127 aaKnown RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 DNAJC24Q6P3W2 148 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 PHF13Q86YI8 300 aaPredicted RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 NIPA2Q8N8Q9 360 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 TMEM161BQ8NDZ6 487 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 TBC1D31Q96DN5 1066 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 ZNF845Q96IR2 970 aaPredicted RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 C7orf26Q96N11 449 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 TMEM237Q96Q45 408 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 NUDT16L1Q9BRJ7 211 aaKnown RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 PITPNM3Q9BZ71 974 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 MIS12Q9H081 205 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 SAR1AQ9NR31 198 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 WRAP73Q9P2S5 460 aaPredicted RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 BAG5Q9UL15 447 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 VPS4AQ9UN37 437 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 B3GNT3Q9Y2A9 372 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 COPG1Q9Y678 874 aaKnown RBP5.02□□□□□ -1.61
LINC00458-202ENST00000427299 IKBKGQ9Y6K9 419 aa5.02□□□□□ -1.61
LINC00458-202ENST00000427299 TBC1D3DA0A087WVF3 549 aa5.01□□□□□ -1.61
LINC00458-202ENST00000427299 TBC1D3IA0A087WXS9 549 aa5.01□□□□□ -1.61
LINC00458-202ENST00000427299 TBC1D3EA0A087X179 549 aa5.01□□□□□ -1.61
LINC00458-202ENST00000427299 TBC1D3KA0A087X1G2 549 aa5.01□□□□□ -1.61
LINC00458-202ENST00000427299 IQANK1A0A1B0GTG1 560 aa5.01□□□□□ -1.61
LINC00458-202ENST00000427299 TBC1D3BA6NDS4 549 aa5.01□□□□□ -1.61
LINC00458-202ENST00000427299 TBC1D3FA6NER0 549 aaPredicted RBP5.01□□□□□ -1.61
LINC00458-202ENST00000427299 IFITM10A6NMD0 228 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms