RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 HOXC13P31276 330 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 ATP6V0D1P61421 351 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 ERVK-8P63133 956 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 TP53BP2Q13625 1128 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 DMC1Q14565 340 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 OR4F3Q6IEY1 312 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 SLC39A13Q96H72 371 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 PLEKHA8Q96JA3 519 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 MYRFLQ96LU7 910 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 LRRC3Q9BY71 257 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 ZDHHC4Q9NPG8 344 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 AGPAT4Q9NRZ5 378 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 PCTPQ9UKL6 214 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 CORINQ9Y5Q5 1042 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 GPR45Q9Y5Y3 372 aa13.11□□□□□ -0.31
USP42-203ENST00000426246 WDR87Q6ZQQ6 2873 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 GNG14A0A1W2PPG7 69 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 SMIM30A4D0T7 59 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 WDR47O94967 919 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 ATF6P18850 670 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 RXRGP48443 463 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 TTPAP49638 278 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 DEFB103AP81534 67 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 BROXQ5VW32 411 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 SULT1C3Q6IMI6 304 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 GPR180Q86V85 440 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 TICAM1Q8IUC6 712 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 PLD3Q8IV08 490 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 TMEM199Q8N511 208 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 SLC13A3Q8WWT9 602 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 PAWRQ96IZ0 340 aaKnown RBP13.1□□□□□ -0.31
USP42-203ENST00000426246 INPP5KQ9BT40 448 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 ANKRD60Q9BZ19 345 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 ZDHHC6Q9H6R6 413 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 TMEM248Q9NWD8 314 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 DNMT3LQ9UJW3 386 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 SCAMP1O15126 338 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 PRAMEF11O60813 436 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 MLYCDO95822 493 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 PEX11BO96011 259 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 HNF4AP41235 474 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 TMED10P49755 219 aaKnown RBP13.1□□□□□ -0.31
USP42-203ENST00000426246 CYBRD1Q53TN4 286 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 HID1Q8IV36 788 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 SYTL1Q8IYJ3 562 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 C7orf57Q8NEG2 295 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 IGSF21Q96ID5 467 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 PANX1Q96RD7 426 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 SLC22A12Q96S37 553 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 RAD21L1Q9H4I0 556 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 TMEM39AQ9NV64 488 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 TRPM5Q9NZQ8 1165 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 MTRRQ9UBK8 725 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 RAPGEFL1Q9UHV5 662 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 PRSS21Q9Y6M0 314 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 ATG2BQ96BY7 2078 aa13.1□□□□□ -0.31
USP42-203ENST00000426246 KPNA5O15131 536 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 KLKB1P03952 638 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 HIST1H2AGP0C0S8 130 aaPredicted RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 ZDHHC11BP0C7U3 371 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 HIST1H2ADP20671 130 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 TXNL4AP83876 142 aaKnown RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 ELAVL2Q12926 359 aaKnown RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 APOFQ13790 326 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 CES5AQ6NT32 575 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 PRMT9Q6P2P2 845 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 THAP5Q7Z6K1 395 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 ZNF683Q8IZ20 524 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 HIST1H2AHQ96KK5 128 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 HIST1H2AJQ99878 128 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 H2AFJQ9BTM1 129 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 RBM38Q9H0Z9 239 aaKnown RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 MTG2Q9H4K7 406 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 TFB2MQ9H5Q4 396 aaKnown RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 COQ6Q9Y2Z9 468 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 REV3LO60673 3130 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 ASPDHA6ND91 283 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 CXCR6O00574 342 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 FAM20BO75063 409 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 TACR1P25103 407 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 HECTD3Q5T447 861 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 PAGE2Q7Z2X7 111 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 EID3Q8N140 333 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 MAL2Q969L2 176 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 RNF38Q9H0F5 515 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 TIMMDC1Q9NPL8 285 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 AIG1Q9NVV5 245 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 AQP12BA6NM10 295 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 CYP7B1O75881 506 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 TIMP1P01033 207 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 SERPIND1P05546 499 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 LINC00271P0C7V0 271 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 EPB42P16452 691 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 HRH2P25021 359 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 OR1E2P47887 323 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 ARHGDIAP52565 204 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 NKX2-5P52952 324 aaPredicted RBP13.09□□□□□ -0.31
USP42-203ENST00000426246 CHRNA6Q15825 494 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 PARP15Q460N3 678 aa13.09□□□□□ -0.31
USP42-203ENST00000426246 KANK2Q63ZY3 851 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms