RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 CAPZBP47756 277 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 BMPR2Q13873 1038 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 ZKSCAN8Q15776 578 aaPredicted RBP23.78■■□□□ 1.4
VEGFA-209ENST00000425836 CCSMST1Q4G0I0 132 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 MROH9Q5TGP6 573 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 TMEM71Q6P5X7 295 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 TTC23LQ6PF05 361 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 B3GNT8Q7Z7M8 397 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 AMIGO1Q86WK6 493 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 DEPDC7Q96QD5 511 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 DPYSL5Q9BPU6 564 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 SYTL2Q9HCH5 934 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 CIDEBQ9UHD4 219 aa23.78■■□□□ 1.4
VEGFA-209ENST00000425836 OR6C74A6NCV1 312 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 ARHGEF33A8MVX0 844 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 TUBBP07437 444 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 STMN1P16949 149 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 ZFP36L1Q07352 338 aaKnown RBP23.77■■□□□ 1.4
VEGFA-209ENST00000425836 TARDBPQ13148 414 aaKnown RBP eCLIP23.77■■□□□ 1.43e-6■■■■□ 20.1
VEGFA-209ENST00000425836 ISXQ2M1V0 245 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 KLHL35Q6PF15 583 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 ERMP1Q7Z2K6 904 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 SLITRK4Q8IW52 837 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 MYO1HQ8N1T3 1032 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 OR4D9Q8NGE8 314 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 DCAKDQ8WVC6 231 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 ANKRD49Q8WVL7 239 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 PDLIM5Q96HC4 596 aaKnown RBP23.77■■□□□ 1.4
VEGFA-209ENST00000425836 DHRS4Q9BTZ2 278 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 MENTQ9BUN1 341 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 SEMA6CQ9H3T2 930 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 GPAMQ9HCL2 828 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 IKBKGQ9Y6K9 419 aa23.77■■□□□ 1.4
VEGFA-209ENST00000425836 OR5K3A6NET4 321 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 PHGDHO43175 533 aaKnown RBP23.76■■□□□ 1.39
VEGFA-209ENST00000425836 CSO75390 466 aaKnown RBP23.76■■□□□ 1.39
VEGFA-209ENST00000425836 MPSTP25325 297 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 GCAP28676 217 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 RAB10P61026 200 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 EEF1AKMT2Q5JPI9 291 aaKnown RBP23.76■■□□□ 1.39
VEGFA-209ENST00000425836 NKAPQ8N5F7 415 aaKnown RBP23.76■■□□□ 1.39
VEGFA-209ENST00000425836 MAGEC3Q8TD91 643 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 CAVIN3Q969G5 261 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 RAD51AP1Q96B01 352 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 RAB33BQ9H082 229 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 ZMYND15Q9H091 742 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 HRASLS2Q9NWW9 162 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 PDP2Q9P2J9 529 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 EPHA6Q9UF33 1036 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 ZNF180Q9UJW8 692 aa23.76■■□□□ 1.39
VEGFA-209ENST00000425836 IGHV5-10-1A0A0J9YXX1 117 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 FAM221BA6H8Z2 402 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 KRT87PA6NCN2 255 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 BTN3A3O00478 584 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 KDM1AO60341 852 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 CATP04040 527 aaKnown RBP23.75■■□□□ 1.39
VEGFA-209ENST00000425836 HSD17B3P37058 310 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 GFERP55789 205 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 CMC1Q7Z7K0 106 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 OOSP2Q86WS3 158 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 PLXDC1Q8IUK5 500 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 DLG3Q92796 817 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 ADAMTS6Q9UKP5 1117 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 KLK13Q9UKR3 277 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 ENTPD2Q9Y5L3 495 aa23.75■■□□□ 1.39
VEGFA-209ENST00000425836 CAPN5O15484 640 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-209ENST00000425836 C9P02748 559 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 POLR2CP19387 275 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-209ENST00000425836 SPINK2P20155 84 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 SHMT2P34897 504 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 SERPINB9P50453 376 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 INHBCP55103 352 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 UBE2R2Q712K3 238 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-209ENST00000425836 ADGRF3Q8IZF5 1079 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 FBXO15Q8NCQ5 510 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-209ENST00000425836 TMEM74Q96NL1 305 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 IL17FQ96PD4 163 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 SCNM1Q9BWG6 230 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 OR6C2Q9NZP2 312 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 IKZF3Q9UKT9 509 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 MN1Q10571 1320 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-209ENST00000425836 MED19A0JLT2 244 aaPredicted RBP23.74■■□□□ 1.39
VEGFA-209ENST00000425836 BTN3A1O00481 513 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 ZBTB14O43829 449 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 SHBGP04278 402 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 C8GP07360 202 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 CRABP2P29373 138 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 PKLRP30613 574 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 CCKBRP32239 447 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 RAB28P51157 221 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 PPP1CAP62136 330 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 IRGCQ6NXR0 463 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 OR9A1PQ8NGU1 263 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 ZDHHC12Q96GR4 267 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 TGM7Q96PF1 710 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 CCDC77Q9BR77 488 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 SLC12A9Q9BXP2 914 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 FETUBQ9UGM5 382 aa23.74■■□□□ 1.39
VEGFA-209ENST00000425836 MYO1CO00159 1063 aa23.73■■□□□ 1.39
VEGFA-209ENST00000425836 RASGRF2O14827 1237 aa23.73■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms