RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 MFSD1Q9H3U5 465 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 PCTPQ9UKL6 214 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 DICER1Q9UPY3 1922 aaKnown RBP13.22□□□□□ -0.29
LRCH3-203ENST00000425562 ILVBLA1L0T0 632 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 SLC7A4O43246 635 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 NUAK1O60285 661 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 MMP2P08253 660 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 ACVRL1P37023 503 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 AIF1P55008 147 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 MRPS6P82932 125 aaKnown RBP13.22□□□□□ -0.29
LRCH3-203ENST00000425562 MAPKAPK3Q16644 382 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 RAP1GAP2Q684P5 730 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 OVOS1Q6IE37 1185 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 GPR153Q6NV75 609 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.22□□□□□ -0.29
LRCH3-203ENST00000425562 USP50Q70EL3 339 aaPredicted RBP13.22□□□□□ -0.29
LRCH3-203ENST00000425562 VTCN1Q7Z7D3 282 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 SCD5Q86SK9 330 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 MMAAQ8IVH4 418 aaKnown RBP13.22□□□□□ -0.29
LRCH3-203ENST00000425562 OR4K2Q8NGD2 314 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 OR4L1Q8NH43 312 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 RHBDF1Q96CC6 855 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 VMP1Q96GC9 406 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 CDK5RAP1Q96SZ6 601 aaKnown RBP13.22□□□□□ -0.29
LRCH3-203ENST00000425562 CHCHD6Q9BRQ6 235 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 EMILIN2Q9BXX0 1053 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 CATSPERBQ9H7T0 1116 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 TAS2R16Q9NYV7 291 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 SLC25A37Q9NYZ2 338 aa13.22□□□□□ -0.29
LRCH3-203ENST00000425562 ELOVL7A1L3X0 281 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 TULP3O75386 442 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 NDUFS3O75489 264 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 DNAJB1P25685 340 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 CLK3P49761 638 aaKnown RBP13.21□□□□□ -0.29
LRCH3-203ENST00000425562 CASP9P55211 416 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 GBX1Q14549 363 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 SLC39A12Q504Y0 691 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 SNAP47Q5SQN1 464 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 MRNIPQ6NTE8 343 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 SPATA19Q7Z5L4 167 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 METTL4Q8N3J2 472 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 TTC9BQ8N6N2 239 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 ATG16L2Q8NAA4 619 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 CDC26Q8NHZ8 85 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 ISG20Q96AZ6 181 aaKnown RBP13.21□□□□□ -0.29
LRCH3-203ENST00000425562 LINGO1Q96FE5 620 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 APOL5Q9BWW9 433 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 RERGLQ9H628 205 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 OPTCQ9UBM4 332 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 PTCH2Q9Y6C5 1203 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 AIREO43918 545 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 UROSP10746 265 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 ODC1P11926 461 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 DNAJB2P25686 324 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 AQP1P29972 269 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 GRK5P34947 590 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 THPOP40225 353 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 CPT1AP50416 773 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 PURAQ00577 322 aaKnown RBP13.21□□□□□ -0.29
LRCH3-203ENST00000425562 SETMARQ53H47 684 aaPredicted RBP13.21□□□□□ -0.29
LRCH3-203ENST00000425562 ZNF648Q5T619 568 aaPredicted RBP13.21□□□□□ -0.29
LRCH3-203ENST00000425562 PIK3R6Q5UE93 754 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 CFAP52Q8N1V2 620 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 TMEM86AQ8N2M4 240 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 GOLM1Q8NBJ4 401 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 IMP4Q96G21 291 aaKnown RBP13.21□□□□□ -0.29
LRCH3-203ENST00000425562 ZBED2Q9BTP6 218 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 HACD3Q9P035 362 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 MED16Q9Y2X0 877 aa13.21□□□□□ -0.29
LRCH3-203ENST00000425562 HAS3O00219 553 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 CCRL2O00421 344 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 RGS10O43665 173 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 KERAO60938 352 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 KRT20P35900 424 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 RAD51Q06609 339 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 EFEMP1Q12805 493 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 PPP2R2DQ66LE6 453 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 GDPD3Q7L5L3 318 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 METTL23Q86XA0 190 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 SPATA2LQ8IUW3 424 aaPredicted RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 PIANPQ8IYJ0 282 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 OR8H2Q8N162 312 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 ZNF548Q8NEK5 533 aaPredicted RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 GIPC2Q8TF65 315 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 SLC13A3Q8WWT9 602 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 NEDD4LQ96PU5 975 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 OR51E2Q9H255 320 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 ACOT13Q9NPJ3 140 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 SCN3BQ9NY72 215 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 PDP1Q9P0J1 537 aaPredicted RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 KIF17Q9P2E2 1029 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 GOLGA4Q13439 2230 aaKnown RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 ZNF236Q9UL36 1845 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 PDZK1P1A8MUH7 402 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 SH3BGRLO75368 114 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 HNRNPFP52597 415 aaKnown RBP13.2□□□□□ -0.3
LRCH3-203ENST00000425562 FCGRTP55899 365 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 NFKB2Q00653 900 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 CREMQ03060 361 aa13.2□□□□□ -0.3
LRCH3-203ENST00000425562 TAB1Q15750 504 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms