RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 OXNAD1Q96HP4 312 aaPredicted RBP11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CALR3Q96L12 384 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PPM1MQ96MI6 270 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 HGH1Q9BTY7 390 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 KLHL25Q9H0H3 589 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 GBA3Q9H227 469 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 MRM3Q9HC36 420 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CDC23Q9UJX2 597 aa11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 NXT1Q9UKK6 140 aaKnown RBP11.85□□□□□ -0.51
HLA-DQB3-203ENST00000425319 A0A0J9YY10 115 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 MACROD2A1Z1Q3 448 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CCDC78A2IDD5 438 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 AGAP14A8MT82 685 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 GPR39O43194 453 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 LRRTM2O43300 516 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 KLF7O75840 302 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 OR56A5P0C7T3 313 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 EDN3P14138 238 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 RBL1P28749 1068 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TNFRSF8P28908 595 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 MC4RP32245 332 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 NSG1P42857 185 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 BOP1Q14137 746 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TCTE1Q5JU00 501 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 YOD1Q5VVQ6 348 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 PRAMEF13Q5VWM6 474 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 B3GNTL1Q67FW5 361 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SP5Q6BEB4 398 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 UNC5AQ6ZN44 842 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TICAM1Q8IUC6 712 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ADGRF3Q8IZF5 1079 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 TTC29Q8NA56 475 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 CNDP1Q96KN2 507 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 QKIQ96PU8 341 aaKnown RBP eCLIP11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 DNAJC7Q99615 494 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SPRTNQ9H040 489 aaPredicted RBP11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 OR52A5Q9H2C5 316 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 FAM96AQ9H5X1 160 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 XKR8Q9H6D3 395 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SMARCAL1Q9NZC9 954 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 SUCOQ9UBS9 1254 aaKnown RBP11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 NENFQ9UMX5 172 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ENTPD4Q9Y227 616 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 OSGIN2Q9Y236 505 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 MRFAP1Q9Y605 127 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 ALG6Q9Y672 507 aa11.84□□□□□ -0.51
HLA-DQB3-203ENST00000425319 hCG_1818297A0A087WSY0 165 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 DYTNA2CJ06 578 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 GOLGA6L9A6NEM1 432 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 APOC4-APOC2K7ER74 178 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 GAPDHSO14556 408 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 AP2A1O95782 977 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 APOC2P02655 101 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CHRM5P08912 532 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PVRP15151 417 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PECAM1P16284 738 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 UGT2B7P16662 529 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MMP11P24347 488 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ACRV1P26436 265 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CARSP49589 748 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 NAP1L1P55209 391 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 XIAPP98170 497 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OCA2Q04671 838 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CACNG1Q06432 222 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PTPRCAPQ14761 206 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 GRM7Q14831 915 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ZNF169Q14929 603 aaPredicted RBP11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TCEAL1Q15170 157 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SPA17Q15506 151 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 RBBP7Q16576 425 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ANKRD20A2Q5SQ80 823 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FAM182AQ5T1J6 154 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ANKRD20A1Q5TYW2 823 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ANKRD20A3Q5VUR7 823 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MTFR2Q6P444 385 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 OVCH1Q7RTY7 1134 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 KCNMB4Q86W47 210 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SERPINA9Q86WD7 417 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 KATNAL2Q8IYT4 538 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CCDC110Q8TBZ0 833 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 STYXQ8WUJ0 223 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FAR1Q8WVX9 515 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 ELMO1Q92556 727 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 FKBP10Q96AY3 582 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MRFAP1L1Q96HT8 127 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TBL1YQ9BQ87 522 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 LHPPQ9H008 270 aa11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 DHCR7Q9UBM7 475 aaKnown RBP11.83□□□□□ -0.52
HLA-DQB3-203ENST00000425319 SYCE3A1L190 88 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 KCNN4O15554 427 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TJP3O95049 919 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CXCR2P25025 360 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 PDHA2P29803 388 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CA5AP35218 305 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 MAGEA1P43355 309 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TSFMP43897 325 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 CASP6P55212 293 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 EIF3EP60228 445 aaKnown RBP11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 AP2B1P63010 937 aa11.82□□□□□ -0.52
HLA-DQB3-203ENST00000425319 TAZQ16635 292 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms