RNA–Protein interactions for RNA: ENST00000423635.5

CHCHD3-202, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 1 (best)

Gene CHCHD3, Length 1,310 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-202ENST00000423635 TDGF1P3P51864 188 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 BOP1Q14137 746 aaKnown RBP16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 NR1I3Q14994 352 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 NFKBIBQ15653 356 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 IRAK1BP1Q5VVH5 260 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 KIRREL2Q6UWL6 708 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 OVCH1Q7RTY7 1134 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 HOOK3Q86VS8 718 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 DNAJC22Q8N4W6 341 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 FKBP10Q96AY3 582 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 DCUN1D1Q96GG9 259 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 OXNAD1Q96HP4 312 aaPredicted RBP16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 WDR54Q9H977 334 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 NUP210LQ5VU65 1888 aa16.12■□□□□ 0.17
CHCHD3-202ENST00000423635 MED13LQ71F56 2210 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 CCDC168Q8NDH2 2452 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 ALOX12BO75342 701 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 H2AFZP0C0S5 128 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 RALBP11234 206 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 ATP1B2P14415 290 aaPredicted RBP16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 UGT2B7P16662 529 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 HTR1EP28566 365 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 PDHA2P29803 388 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 NR2C2P49116 596 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 XIAPP98170 497 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 RPA4Q13156 261 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 PRKG2Q13237 762 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 MPP3Q13368 585 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 TESK1Q15569 626 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 SLC5A12Q1EHB4 618 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 DEFB110Q30KQ9 67 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 ISLR2Q6UXK2 745 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 CLEC17AQ6ZS10 378 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 H2AFVQ71UI9 128 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 BZW1Q7L1Q6 419 aaKnown RBP16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 ZNF808Q8N4W9 903 aaPredicted RBP16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 CATSPER1Q8NEC5 780 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 FLVCR1-AS1Q8TAF5 88 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 HEXDCQ8WVB3 486 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 TFGQ92734 400 aaPredicted RBP16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 NDC1Q9BTX1 674 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 SLC26A1Q9H2B4 701 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 DEF6Q9H4E7 631 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 CDC23Q9UJX2 597 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 ICKQ9UPZ9 632 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 HS3ST3B1Q9Y662 390 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 ARL5AQ9Y689 179 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 NF1P21359 2839 aa16.11■□□□□ 0.17
CHCHD3-202ENST00000423635 C2orf81A6NN90 581 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 MFAP5Q13361 173 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 TAF1AQ15573 450 aaPredicted RBP16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 UNC5AQ6ZN44 842 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 MRGPRGQ86SM5 289 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 TRIM73Q86UV7 250 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 RFX6Q8HWS3 928 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 NXPE1Q8N323 547 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 OR4K2Q8NGD2 314 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 TFB1MQ8WVM0 346 aaKnown RBP16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 SPSB2Q99619 263 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 BPIFA3Q9BQP9 254 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 TRIM8Q9BZR9 551 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 MRM3Q9HC36 420 aaKnown RBP16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 FKBPLQ9UIM3 349 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 ITGB1BP2Q9UKP3 347 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 PLCL2Q9UPR0 1127 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 ITPR3Q14573 2671 aa16.1■□□□□ 0.17
CHCHD3-202ENST00000423635 C5orf60A6NFR6 353 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 KLHL18O94889 574 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 ATXN8OSP0DMR3 200 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 PIM1P11309 404 aaPredicted RBP16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 COX6B1P14854 86 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 ITGAXP20702 1163 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 ALAS2P22557 587 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 SHMT2P34897 504 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 KCNK10P57789 538 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 Q0VFX4 171 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 NKG7Q16617 165 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 SPNS3Q6ZMD2 512 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 PID1Q7Z2X4 250 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 ZNF295-AS1Q8N0V1 137 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 IPMKQ8NFU5 416 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 OR1N1Q8NGS0 311 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 DENND1AQ8TEH3 1009 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 NR4A3Q92570 626 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 DLG3Q92796 817 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 ULK4Q96C45 1275 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 CCDC120Q96HB5 630 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 THOC3Q96J01 351 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 TAAR6Q96RI8 345 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 VAT1Q99536 393 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 COPS8Q99627 209 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 C19orf43Q9BQ61 176 aa16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 SUCOQ9UBS9 1254 aaKnown RBP16.09■□□□□ 0.17
CHCHD3-202ENST00000423635 A0A0J9YY10 115 aa16.08■□□□□ 0.16
CHCHD3-202ENST00000423635 SMTNL1A8MU46 457 aa16.08■□□□□ 0.16
CHCHD3-202ENST00000423635 CFAP99D6REC4 459 aa16.08■□□□□ 0.16
CHCHD3-202ENST00000423635 CHRM5P08912 532 aaPredicted RBP16.08■□□□□ 0.16
CHCHD3-202ENST00000423635 ARSFP54793 590 aa16.08■□□□□ 0.16
CHCHD3-202ENST00000423635 DYNLT1P63172 113 aa16.08■□□□□ 0.16
CHCHD3-202ENST00000423635 TMPRSS15P98073 1019 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms