RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 SUCLA2Q9P2R7 463 aaPredicted RBP3.46□□□□□ -1.86
LINC00397-201ENST00000422074 HACL1Q9UJ83 578 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 MTUS1Q9ULD2 1270 aa3.46□□□□□ -1.86
LINC00397-201ENST00000422074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP3.46□□□□□ -1.86
LINC00397-201ENST00000422074 OR2A25A4D2G3 310 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 AGAP14A8MT82 685 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 PTGES3LE9PB15 166 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 VILLO15195 856 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 OR10H2O60403 315 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 MED24O75448 989 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 DFFBO76075 338 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 ARSEP51690 589 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 MFAP4P55083 255 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 CDK3Q00526 305 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 XKR6Q5GH73 641 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 LDB1Q86U70 411 aaPredicted RBP3.45□□□□□ -1.86
LINC00397-201ENST00000422074 C1orf131Q8NDD1 294 aaKnown RBP3.45□□□□□ -1.86
LINC00397-201ENST00000422074 OR5AP2Q8NGF4 316 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 OR13J1Q8NGT2 312 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 OR4C3Q8NH37 302 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 SUSD6Q92537 303 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 KRT12Q99456 494 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 PKP2Q99959 881 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 SYT15Q9BQS2 421 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 LMF2Q9BU23 707 aaKnown RBP3.45□□□□□ -1.86
LINC00397-201ENST00000422074 TRAF4Q9BUZ4 470 aaPredicted RBP3.45□□□□□ -1.86
LINC00397-201ENST00000422074 DPAGT1Q9H3H5 408 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 SMARCAD1Q9H4L7 1026 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 ATP13A3Q9H7F0 1226 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 ZNF148Q9UQR1 794 aa3.45□□□□□ -1.86
LINC00397-201ENST00000422074 WBP11Q9Y2W2 641 aaKnown RBP3.45□□□□□ -1.86
LINC00397-201ENST00000422074 MYH14Q7Z406 1995 aaKnown RBP3.45□□□□□ -1.86
LINC00397-201ENST00000422074 ARID2Q68CP9 1835 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 MOCS3O95396 460 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 ZNF10P21506 573 aaPredicted RBP3.44□□□□□ -1.86
LINC00397-201ENST00000422074 NKX2-1P43699 371 aaPredicted RBP3.44□□□□□ -1.86
LINC00397-201ENST00000422074 NOVP48745 357 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 KRT33BQ14525 404 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 RRS1Q15050 365 aaKnown RBP3.44□□□□□ -1.86
LINC00397-201ENST00000422074 PDLIM3Q53GG5 364 aaPredicted RBP3.44□□□□□ -1.86
LINC00397-201ENST00000422074 TMED8Q6PL24 325 aaPredicted RBP3.44□□□□□ -1.86
LINC00397-201ENST00000422074 HAUS6Q7Z4H7 955 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 AACSQ86V21 672 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 CEP57L1Q8IYX8 460 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 OR2AJ1Q8NGZ0 328 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 IRGQQ8WZA9 623 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 MAGED4Q96JG8 741 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 TREX2Q9BQ50 279 aaPredicted RBP3.44□□□□□ -1.86
LINC00397-201ENST00000422074 DCTN5Q9BTE1 182 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 FUCA2Q9BTY2 467 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 CPVLQ9H3G5 476 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 SYNCQ9H7C4 482 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 OSER1Q9NX31 292 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 ERAP1Q9NZ08 941 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 GRIP1Q9Y3R0 1128 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 RIPK3Q9Y572 518 aa3.44□□□□□ -1.86
LINC00397-201ENST00000422074 HYKKA2RU49 373 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 DOK2O60496 412 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 PRAMEF11O60813 436 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 IGHV4-31P0DP07 118 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 GATA1P15976 413 aaPredicted RBP3.43□□□□□ -1.86
LINC00397-201ENST00000422074 SLC15A1P46059 708 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 GSDMDP57764 484 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 IRX6P78412 446 aaPredicted RBP3.43□□□□□ -1.86
LINC00397-201ENST00000422074 TMF1P82094 1093 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 SNAI3Q3KNW1 292 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 DUSP28Q4G0W2 176 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 RILPL1Q5EBL4 403 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 DHRS7BQ6IAN0 325 aaPredicted RBP3.43□□□□□ -1.86
LINC00397-201ENST00000422074 SPINK14Q6IE38 97 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 FIGLAQ6QHK4 219 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 CEP57Q86XR8 500 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 SAT2Q96F10 170 aaPredicted RBP3.43□□□□□ -1.86
LINC00397-201ENST00000422074 C18orf12Q96KH6 178 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 AGAP3Q96P47 875 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 FGF21Q9NSA1 209 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 PSD3Q9NYI0 1048 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 ZNF215Q9UL58 517 aaPredicted RBP3.43□□□□□ -1.86
LINC00397-201ENST00000422074 GRID1Q9ULK0 1009 aa3.43□□□□□ -1.86
LINC00397-201ENST00000422074 RSF1Q96T23 1441 aaPredicted RBP3.43□□□□□ -1.86
LINC00397-201ENST00000422074 A6NCN8 305 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 XRCC3O43542 346 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 TSPAN9O75954 239 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 VPREB1P12018 145 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 ALOX12P18054 663 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 TRIM21P19474 475 aaKnown RBP3.42□□□□□ -1.86
LINC00397-201ENST00000422074 HNRNPDQ14103 355 aaKnown RBP3.42□□□□□ -1.86
LINC00397-201ENST00000422074 SGSM1Q2NKQ1 1148 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 KLHL26Q53HC5 615 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 CFAP161Q6P656 301 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 TMCO3Q6UWJ1 677 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 ADIPOR2Q86V24 386 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 COMMD2Q86X83 199 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 RPAP2Q8IXW5 612 aaPredicted RBP3.42□□□□□ -1.86
LINC00397-201ENST00000422074 PRSS33Q8NF86 280 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 OR5M8Q8NGP6 311 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 PTPMT1Q8WUK0 201 aaPredicted RBP3.42□□□□□ -1.86
LINC00397-201ENST00000422074 PHLDA1Q8WV24 401 aaPredicted RBP3.42□□□□□ -1.86
LINC00397-201ENST00000422074 IWS1Q96ST2 819 aa3.42□□□□□ -1.86
LINC00397-201ENST00000422074 CLEC7AQ9BXN2 247 aa3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms