RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 SPRY4Q9C004 299 aa25.6■■□□□ 1.69
CDK9-202ENST00000421939 FBXO6Q9NRD1 293 aaPredicted RBP25.6■■□□□ 1.69
CDK9-202ENST00000421939 C1GALT1Q9NS00 363 aa25.6■■□□□ 1.69
CDK9-202ENST00000421939 ACTR10Q9NZ32 417 aa25.6■■□□□ 1.69
CDK9-202ENST00000421939 TMEM184BQ9Y519 407 aaPredicted RBP25.6■■□□□ 1.69
CDK9-202ENST00000421939 EFCAB8A8MWE9 144 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 K7ENP7 123 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 F7P08709 466 aaPredicted RBP25.59■■□□□ 1.69
CDK9-202ENST00000421939 TPBGLP0DKB5 382 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 FGF5P12034 268 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 FOLR1P15328 257 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 PRDX3P30048 256 aaKnown RBP25.59■■□□□ 1.69
CDK9-202ENST00000421939 ITGA8P53708 1063 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 ACY1Q03154 408 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 CTBP1Q13363 440 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 INO80CQ6PI98 192 aaPredicted RBP25.59■■□□□ 1.69
CDK9-202ENST00000421939 UNC5AQ6ZN44 842 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 KCNMB4Q86W47 210 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 CACNA2D3Q8IZS8 1091 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 IL22RA1Q8N6P7 574 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 SNRNP27Q8WVK2 155 aaKnown RBP25.59■■□□□ 1.69
CDK9-202ENST00000421939 FAM136AQ96C01 138 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 ELMO2Q96JJ3 720 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 PITPNM3Q9BZ71 974 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 ULBP3Q9BZM4 244 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 PDE7BQ9NP56 450 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 SOHLH2Q9NX45 425 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 OR6C2Q9NZP2 312 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 PLAGL1Q9UM63 463 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 BTRCQ9Y297 605 aa25.59■■□□□ 1.69
CDK9-202ENST00000421939 E5RI56 91 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 DLGAP3O95886 979 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 CHRM3P20309 590 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 HIF1AQ16665 826 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 HSP90AA5PQ58FG0 334 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 SPANXN3Q5MJ09 141 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 PPP1R3BQ86XI6 285 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 RASGRP3Q8IV61 690 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 UNC5BQ8IZJ1 945 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 NLGN4XQ8N0W4 816 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 NLGN4YQ8NFZ3 816 aaPredicted RBP25.58■■□□□ 1.69
CDK9-202ENST00000421939 SKA2Q8WVK7 121 aaPredicted RBP25.58■■□□□ 1.69
CDK9-202ENST00000421939 PWWP2AQ96N64 755 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 CCDC68Q9H2F9 335 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 FBXO5Q9UKT4 447 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 RARRES3Q9UL19 164 aa25.58■■□□□ 1.69
CDK9-202ENST00000421939 TEX51A0A1B0GUA7 166 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 PIPSLA2A3N6 862 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 SLC9B1P1A6NJY1 282 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 EFSO43281 561 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 CHRM5P08912 532 aaPredicted RBP25.57■■□□□ 1.68
CDK9-202ENST00000421939 ATP5DP30049 168 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 PKLRP30613 574 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 ARL4CP56559 192 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 MPP1Q00013 466 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 C2orf54Q08AI8 447 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 GBX1Q14549 363 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 LARP7Q4G0J3 582 aaKnown RBP eCLIP25.57■■□□□ 1.68
CDK9-202ENST00000421939 SPESP1Q6UW49 350 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 IGDCC3Q8IVU1 814 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 ZBTB2Q8N680 514 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 FGF21Q9NSA1 209 aa25.57■■□□□ 1.68
CDK9-202ENST00000421939 IARS2Q9NSE4 1012 aaKnown RBP25.57■■□□□ 1.68
CDK9-202ENST00000421939 NDC80O14777 642 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 ZNF28P17035 718 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 RPL21P46778 160 aaKnown RBP25.56■■□□□ 1.68
CDK9-202ENST00000421939 RAB28P51157 221 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 MRPS25P82663 173 aaKnown RBP25.56■■□□□ 1.68
CDK9-202ENST00000421939 KYNUQ16719 465 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 TMTC4Q5T4D3 741 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 TIPARPQ7Z3E1 657 aaKnown RBP25.56■■□□□ 1.68
CDK9-202ENST00000421939 GABPB2Q8TAK5 448 aaPredicted RBP25.56■■□□□ 1.68
CDK9-202ENST00000421939 LRRC39Q96DD0 335 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 TWSG1Q9GZX9 223 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 SPHK1Q9NYA1 384 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 CHMP2BQ9UQN3 213 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 RUVBL2Q9Y230 463 aaKnown RBP25.56■■□□□ 1.68
CDK9-202ENST00000421939 NFS1Q9Y697 457 aa25.56■■□□□ 1.68
CDK9-202ENST00000421939 FAM187AA6NFU0 413 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 TP73O15350 636 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 SPAG6O75602 509 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 ERVK-10P10266 1014 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 ST6GAL1P15907 406 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 UGT2B7P16662 529 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 MAP4P27816 1152 aaKnown RBP25.55■■□□□ 1.68
CDK9-202ENST00000421939 ELK3P41970 407 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 TUBB4BP68371 445 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 TUBB2AQ13885 445 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 MAP7Q14244 749 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 HP1BP3Q5SSJ5 553 aaPredicted RBP25.55■■□□□ 1.68
CDK9-202ENST00000421939 CNSTQ6PJW8 725 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 MAATS1Q7Z4T9 603 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 BPHLQ86WA6 291 aaPredicted RBP25.55■■□□□ 1.68
CDK9-202ENST00000421939 KCNJ9Q92806 393 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 RNF31Q96EP0 1072 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 CFAP36Q96G28 342 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 C16orf45Q96MC5 204 aaPredicted RBP25.55■■□□□ 1.68
CDK9-202ENST00000421939 FOPNLQ96NB1 174 aa25.55■■□□□ 1.68
CDK9-202ENST00000421939 WDR83Q9BRX9 315 aaKnown RBP25.55■■□□□ 1.68
CDK9-202ENST00000421939 MENTQ9BUN1 341 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms