RNA–Protein interactions for RNA: ENST00000421756.5

MCF2L-213, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best) BASIC

Gene MCF2L, Length 3,560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-213ENST00000421756 SLC44A2Q8IWA5 706 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-213ENST00000421756 OR7A2PQ8NGA2 310 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 MIPOL1Q8TD10 442 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 APIPQ96GX9 242 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 ZFRQ96KR1 1074 aaKnown RBP13.05□□□□□ -0.32
MCF2L-213ENST00000421756 SLC46A2Q9BY10 475 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 KPNA3O00505 521 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-213ENST00000421756 DLGAP1O14490 977 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 GAPDHSO14556 408 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-213ENST00000421756 HOXA2O43364 376 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 RGS14O43566 566 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 SERPINA1P01009 418 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 RFC2P35250 354 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 SPAM1P38567 509 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 STARD3Q14849 445 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 ZCCHC8Q6NZY4 707 aaKnown RBP13.05□□□□□ -0.32
MCF2L-213ENST00000421756 DOK6Q6PKX4 331 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 CARM1Q86X55 608 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 ZFAND4Q86XD8 727 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 B4GALNT2Q8NHY0 566 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 THAP11Q96EK4 314 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 ZNF382Q96SR6 550 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 CDK5RAP1Q96SZ6 601 aaKnown RBP13.05□□□□□ -0.32
MCF2L-213ENST00000421756 TTLL2Q9BWV7 592 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 BRD9Q9H8M2 597 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 RASSF1Q9NS23 344 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 CEPT1Q9Y6K0 416 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 REV3LO60673 3130 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 TOR1BO14657 336 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 STATHP02808 62 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 BCKDHAP12694 445 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 TNFRSF1BP20333 461 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 AGXTP21549 392 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 FSHRP23945 695 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 ITGB8P26012 769 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 ACRV1P26436 265 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 CCR2P41597 374 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 ZFP36L2P47974 494 aaKnown RBP13.05□□□□□ -0.32
MCF2L-213ENST00000421756 ASTLQ6HA08 431 aaPredicted RBP13.05□□□□□ -0.32
MCF2L-213ENST00000421756 ZDHHC13Q8IUH4 622 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 OR2AP1Q8NGE2 309 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 CERS4Q9HA82 394 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 CXorf21Q9HAI6 301 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 NUDT4Q9NZJ9 180 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 SH3BP4Q9P0V3 963 aa13.05□□□□□ -0.32
MCF2L-213ENST00000421756 STX16O14662 325 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 XPNPEP2O43895 674 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 ANXA5P08758 320 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 HLA-EP13747 358 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 S100A3P33764 101 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 CCT8P50990 548 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 METAP1P53582 386 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 BNIP2Q12982 314 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 BNIP3Q12983 259 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 CHIT1Q13231 466 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 KCTD21Q4G0X4 260 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 DLEU7Q6UYE1 221 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 NXPE1Q8N323 547 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 RIN3Q8TB24 985 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 RHBDF1Q96CC6 855 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 CD244Q9BZW8 370 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 FANCEQ9HB96 536 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 PREBQ9HCU5 417 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 PDE10AQ9Y233 779 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 PCDHB14Q9Y5E9 798 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 CFAP20Q9Y6A4 193 aaKnown RBP13.04□□□□□ -0.32
MCF2L-213ENST00000421756 CHD5Q8TDI0 1954 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 TTC34A8MYJ7 566 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 LEFTY2O00292 366 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 FTH1P02794 183 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 OPN1SWP03999 348 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 ANXA6P08133 673 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 SRCP12931 536 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 HOXB8P17481 243 aaPredicted RBP13.04□□□□□ -0.32
MCF2L-213ENST00000421756 CALRP27797 417 aaKnown RBP13.04□□□□□ -0.32
MCF2L-213ENST00000421756 SHMT2P34897 504 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 ENTPD1P49961 510 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 CYP4F3Q08477 520 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 NAE1Q13564 534 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 FAM98BQ52LJ0 330 aaKnown RBP13.04□□□□□ -0.32
MCF2L-213ENST00000421756 ARSIQ5FYB1 569 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 XKR7Q5GH72 579 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 FGD3Q5JSP0 725 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 PRMT9Q6P2P2 845 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 VTCN1Q7Z7D3 282 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 CLECL1Q8IZS7 167 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 STK40Q8N2I9 435 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 NETO1Q8TDF5 533 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 MAL2Q969L2 176 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 P2RY13Q9BPV8 354 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 BDH2Q9BUT1 245 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 TRIM54Q9BYV2 358 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 RIBC2Q9H4K1 309 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 ZNF696Q9H7X3 374 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 SARDHQ9UL12 918 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 DMTF1Q9Y222 760 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 AQP12BA6NM10 295 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 J3QRK9 145 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 K7EPI3 171 aa13.04□□□□□ -0.32
MCF2L-213ENST00000421756 EEDO75530 441 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms