RNA–Protein interactions for RNA: ENST00000421670.3

DDX55-203, Transcript of DEAD-box helicase 55, humanhuman

TSL 1 (best) BASIC

Gene DDX55, Length 1,574 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-203ENST00000421670 SMC6Q96SB8 1091 aa15.29■□□□□ 0.04
DDX55-203ENST00000421670 SLC40A1Q9NP59 571 aa15.29■□□□□ 0.04
DDX55-203ENST00000421670 NOVA2Q9UNW9 492 aaKnown RBP15.29■□□□□ 0.04
DDX55-203ENST00000421670 PDE10AQ9Y233 779 aa15.29■□□□□ 0.04
DDX55-203ENST00000421670 COPEO14579 308 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 PPM1DO15297 605 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 SYF2O95926 243 aaKnown RBP15.28■□□□□ 0.04
DDX55-203ENST00000421670 RPN2P04844 631 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 COL6A2P12110 1019 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 MAPK9P45984 424 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 FASLGP48023 281 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 SLC18A2Q05940 514 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 SP140Q13342 867 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 BIRC2Q13490 618 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 TSNAXIP1Q2TAA8 658 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 TTMPQ5BVD1 217 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 CHCHD2P9Q5T1J5 151 aaPredicted RBP15.28■□□□□ 0.04
DDX55-203ENST00000421670 C16orf46Q6P387 395 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 KLC3Q6P597 504 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 ADAMTSL2Q86TH1 951 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 ISCA2Q86U28 154 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 GOLGA6L1Q8N7Z2 621 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 BANPQ8N9N5 519 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 FAM181AQ8N9Y4 354 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 KIAA1191Q96A73 305 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 APOPT1Q96IL0 206 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 SCYL1Q96KG9 808 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 SLC12A9Q9BXP2 914 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 STMN4Q9H169 189 aaPredicted RBP15.28■□□□□ 0.04
DDX55-203ENST00000421670 C12orf65Q9H3J6 166 aaKnown RBP15.28■□□□□ 0.04
DDX55-203ENST00000421670 ACBD3Q9H3P7 528 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 STN1Q9H668 368 aaKnown RBP15.28■□□□□ 0.04
DDX55-203ENST00000421670 MVB12BQ9H7P6 319 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 SENP1Q9P0U3 644 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 XPR1Q9UBH6 696 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 RNF112Q9ULX5 631 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 RNF215Q9Y6U7 377 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 COLEC10Q9Y6Z7 277 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 PCM1Q15154 2024 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 TK2O00142 265 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 GLRA3O75311 464 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 CYP2A7P20853 494 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 MAP4P27816 1152 aaKnown RBP15.28■□□□□ 0.04
DDX55-203ENST00000421670 KCNC1P48547 511 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 GRB7Q14451 532 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 ACAP2Q15057 778 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 PLCL1Q15111 1095 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 NR0B2Q15466 257 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 PROX2Q3B8N5 592 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 TECRLQ5HYJ1 363 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 GUSBP11Q6P575 273 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 FRA10AC1Q70Z53 315 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 OR52E1Q8NGJ3 308 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 TLCD1Q96CP7 247 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 TFB2MQ9H5Q4 396 aaKnown RBP15.28■□□□□ 0.04
DDX55-203ENST00000421670 KIR3DX1Q9H7L2 352 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 PARVBQ9HBI1 364 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 TMEM216Q9P0N5 145 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 PADI4Q9UM07 663 aa15.28■□□□□ 0.04
DDX55-203ENST00000421670 PTPRZ1P23471 2315 aaPredicted RBP15.27■□□□□ 0.04
DDX55-203ENST00000421670 NCF1BA6NI72 391 aaPredicted RBP15.27■□□□□ 0.03
DDX55-203ENST00000421670 NCF1CA8MVU1 366 aaPredicted RBP15.27■□□□□ 0.03
DDX55-203ENST00000421670 SLC16A5O15375 505 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 OPA1O60313 960 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 GUCA1CO95843 209 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 GSTA1P08263 222 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 TPBGLP0DKB5 382 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 NCF1P14598 390 aaPredicted RBP15.27■□□□□ 0.03
DDX55-203ENST00000421670 NDUFS1P28331 727 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 MAGOHP61326 146 aaKnown RBP15.27■□□□□ 0.03
DDX55-203ENST00000421670 DAB2P98082 770 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 N4BP2L1Q5TBK1 243 aaPredicted RBP15.27■□□□□ 0.03
DDX55-203ENST00000421670 TTC23LQ6PF05 361 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 LMNTD1Q8N9Z9 388 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 CNDP2Q96KP4 475 aaKnown RBP15.27■□□□□ 0.03
DDX55-203ENST00000421670 IL17FQ96PD4 163 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 ATOH8Q96SQ7 321 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 TBC1D10AQ9BXI6 508 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 XKR8Q9H6D3 395 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 MKS1Q9NXB0 559 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 CPSF2Q9P2I0 782 aaKnown RBP15.27■□□□□ 0.03
DDX55-203ENST00000421670 LRIT1Q9P2V4 623 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 FTSJ1Q9UET6 329 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 DCDC2Q9UHG0 476 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 EMCNQ9ULC0 261 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 OARD1Q9Y530 152 aa15.27■□□□□ 0.03
DDX55-203ENST00000421670 UNC13CQ8NB66 2214 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 CPED1A4D0V7 1026 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 RHPN2P1A8MT19 583 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 UBXN8O00124 270 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 MYO1CO00159 1063 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 NUDT21O43809 227 aaKnown RBP15.26■□□□□ 0.03
DDX55-203ENST00000421670 KERAO60938 352 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 GLB1P16278 677 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 CRHR1P34998 444 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 CCT5P48643 541 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 RPIAP49247 311 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 KPNA2P52292 529 aaKnown RBP15.26■□□□□ 0.03
DDX55-203ENST00000421670 TGFBIQ15582 683 aa15.26■□□□□ 0.03
DDX55-203ENST00000421670 AGBL2Q5U5Z8 902 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms