RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 GAS8O95995 478 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 AGXTP21549 392 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 STIP1P31948 543 aaKnown RBP16.79■□□□□ 0.28
MSH6-203ENST00000420813 CCL11P51671 97 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 CDH17Q12864 832 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 ZNF385CQ66K41 422 aaPredicted RBP16.79■□□□□ 0.28
MSH6-203ENST00000420813 UNC5AQ6ZN44 842 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 MED25Q71SY5 747 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 HPS6Q86YV9 775 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 TMEM139Q8IV31 216 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 C19orf47Q8N9M1 422 aaKnown RBP16.79■□□□□ 0.28
MSH6-203ENST00000420813 TMEM102Q8N9M5 508 aaPredicted RBP16.79■□□□□ 0.28
MSH6-203ENST00000420813 OR52K1Q8NGK4 314 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 OR5K2Q8NHB8 316 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 TCTN2Q96GX1 697 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 C17orf62Q9BQA9 187 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 FRMD8P1Q9BZ68 369 aaPredicted RBP16.79■□□□□ 0.28
MSH6-203ENST00000420813 KLHL25Q9H0H3 589 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 RBSNQ9H1K0 784 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 OR6C2Q9NZP2 312 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 G3BP2Q9UN86 482 aaKnown RBP16.79■□□□□ 0.28
MSH6-203ENST00000420813 PADI2Q9Y2J8 665 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 ZNF451Q9Y4E5 1061 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 AP1M2Q9Y6Q5 423 aa16.79■□□□□ 0.28
MSH6-203ENST00000420813 TCRBV7S2A1N4TA0A589 114 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 CCDC162PA2VCL2 907 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 TTLL8A6PVC2 850 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 H3BMH7 237 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 SUN1O94901 812 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 OR56A5P0C7T3 313 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 UGT2B7P16662 529 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 RRADP55042 308 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 PTCHD3Q3KNS1 767 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 SYTL3Q4VX76 610 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 AFTPHQ6ULP2 937 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 RAB43Q86YS6 212 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 EFCAB3Q8N7B9 438 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 DNAAF3Q8N9W5 541 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 OR13J1Q8NGT2 312 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 UBE2Q2Q8WVN8 375 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 N4BP2L2Q92802 583 aaPredicted RBP16.78■□□□□ 0.28
MSH6-203ENST00000420813 OR2A14Q96R47 310 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 RANBP9Q96S59 729 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 TTC1Q99614 292 aa16.78■□□□□ 0.28
MSH6-203ENST00000420813 CCDC78A2IDD5 438 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 OR51F1A6NGY5 319 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 OR2B3O76000 313 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 CHRM5P08912 532 aaPredicted RBP16.77■□□□□ 0.28
MSH6-203ENST00000420813 FDFT1P37268 417 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 GABRA4P48169 554 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 ACVR1Q04771 509 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 OASLQ15646 514 aaKnown RBP16.77■□□□□ 0.28
MSH6-203ENST00000420813 CCDC38Q502W7 563 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 RHBDD2Q6NTF9 364 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 TAB3Q8N5C8 712 aaPredicted RBP16.77■□□□□ 0.28
MSH6-203ENST00000420813 ZBTB2Q8N680 514 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 GLIS1Q8NBF1 620 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 GALNT11Q8NCW6 608 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 FLVCR1-AS1Q8TAF5 88 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 PEX13Q92968 403 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 IP6K3Q96PC2 410 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 FAM60AQ9NP50 221 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 CAPN6Q9Y6Q1 641 aa16.77■□□□□ 0.28
MSH6-203ENST00000420813 PCSK5Q92824 1860 aa16.77■□□□□ 0.27
MSH6-203ENST00000420813 ICE1Q9Y2F5 2266 aa16.77■□□□□ 0.27
MSH6-203ENST00000420813 A0A0J9YY10 115 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 BHMG1C9JSJ3 638 aaPredicted RBP16.76■□□□□ 0.27
MSH6-203ENST00000420813 LIASO43766 372 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 DPM1O60762 260 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 VPS4BO75351 444 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 SORBS2O94875 1100 aaKnown RBP16.76■□□□□ 0.27
MSH6-203ENST00000420813 CD63P08962 238 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 TPBGLP0DKB5 382 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 ADRA1DP25100 572 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 KIR2DS3Q14952 304 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 BRD3Q15059 726 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 SLC5A12Q1EHB4 618 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 NADK2Q4G0N4 442 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 DNAJC21Q5F1R6 531 aaKnown RBP16.76■□□□□ 0.27
MSH6-203ENST00000420813 TSTD2Q5T7W7 516 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 NLRP9Q7RTR0 991 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 TRIM73Q86UV7 250 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 RNF10Q8N5U6 811 aaKnown RBP16.76■□□□□ 0.27
MSH6-203ENST00000420813 FDCSPQ8NFU4 85 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 CPT1CQ8TCG5 803 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 PROKR1Q8TCW9 393 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 ATG4AQ8WYN0 398 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 HDAC10Q969S8 669 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 SGSM3Q96HU1 749 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 DESI2Q9BSY9 194 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 ETNK1Q9HBU6 452 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 SPHK1Q9NYA1 384 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 VPS4AQ9UN37 437 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 SRPK3Q9UPE1 567 aa16.76■□□□□ 0.27
MSH6-203ENST00000420813 TDRKHQ9Y2W6 561 aaKnown RBP16.76■□□□□ 0.27
MSH6-203ENST00000420813 A0A0U1RQJ8 604 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 KLF7O75840 302 aaPredicted RBP16.75■□□□□ 0.27
MSH6-203ENST00000420813 GOT2P00505 430 aaKnown RBP16.75■□□□□ 0.27
MSH6-203ENST00000420813 GP1BBP13224 206 aa16.75■□□□□ 0.27
MSH6-203ENST00000420813 PPARGP37231 505 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms