RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 RARRES3Q9UL19 164 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 CRYL1Q9Y2S2 319 aa19.69■□□□□ 0.74
GTF3A-202ENST00000419181 TDRKHQ9Y2W6 561 aaKnown RBP19.69■□□□□ 0.74
GTF3A-202ENST00000419181 PIPSLA2A3N6 862 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 SLC9B1P1A6NJY1 282 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 H3BMM5 538 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 CCDC188H7C350 402 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 NIPSNAP2O75323 286 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 SPAG6O75602 509 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 TIAF1O95411 115 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 S1PR4O95977 384 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 FMO4P31512 558 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 PAFAH1B1P43034 410 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 TUBB4BP68371 445 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 ABHD18Q0P651 414 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 TUBB2AQ13885 445 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 LONRF1Q17RB8 773 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 TAF1BQ53T94 588 aaPredicted RBP19.68■□□□□ 0.74
GTF3A-202ENST00000419181 ZNF789Q5FWF6 425 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 PLEKHS1Q5SXH7 462 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 BPHLQ86WA6 291 aaPredicted RBP19.68■□□□□ 0.74
GTF3A-202ENST00000419181 ESX1Q8N693 406 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 LSM14AQ8ND56 463 aaKnown RBP19.68■□□□□ 0.74
GTF3A-202ENST00000419181 TTC9Q92623 222 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 STAMBPL1Q96FJ0 436 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 FCRL4Q96PJ5 515 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 TUBB2BQ9BVA1 445 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 SOHLH2Q9NX45 425 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 VPS9D1Q9Y2B5 631 aa19.68■□□□□ 0.74
GTF3A-202ENST00000419181 LOC101059948A0A1B0GTJ6 334 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 KDM1AO60341 852 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 KIAA0754O94854 1291 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 RPN2P04844 631 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 CHRM5P08912 532 aaPredicted RBP19.67■□□□□ 0.74
GTF3A-202ENST00000419181 ST6GAL1P15907 406 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 STAT5AP42229 794 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 ABRQ12979 859 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 THOC5Q13769 683 aaKnown RBP19.67■□□□□ 0.74
GTF3A-202ENST00000419181 GBX1Q14549 363 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 TMTC4Q5T4D3 741 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 PWWP2BQ6NUJ5 590 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 SPESP1Q6UW49 350 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 DCUN1D3Q8IWE4 304 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 DENND6AQ8IWF6 608 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 LMNTD2Q8IXW0 634 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 C17orf53Q8N3J3 647 aaPredicted RBP19.67■□□□□ 0.74
GTF3A-202ENST00000419181 ZSCAN1Q8NBB4 408 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 ZNF501Q96CX3 271 aaPredicted RBP19.67■□□□□ 0.74
GTF3A-202ENST00000419181 RNF31Q96EP0 1072 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 MENTQ9BUN1 341 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 C20orf96Q9NUD7 363 aaPredicted RBP19.67■□□□□ 0.74
GTF3A-202ENST00000419181 LNPEPQ9UIQ6 1025 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 PLAGL1Q9UM63 463 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 FAM169AQ9Y6X4 670 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 SNRNP200O75643 2136 aaKnown RBP19.67■□□□□ 0.74
GTF3A-202ENST00000419181 KALRNO60229 2985 aa19.67■□□□□ 0.74
GTF3A-202ENST00000419181 TK2O00142 265 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 MSL3P1P0C860 447 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 PKMP14618 531 aaKnown RBP19.66■□□□□ 0.74
GTF3A-202ENST00000419181 UGT2B7P16662 529 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 PGAM1P18669 254 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 PKLRP30613 574 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 RAB28P51157 221 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 DHX9Q08211 1270 aaKnown RBP19.66■□□□□ 0.74
GTF3A-202ENST00000419181 GRB7Q14451 532 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 GPR19Q15760 415 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 KYNUQ16719 465 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 MSS51Q4VC12 460 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 C6orf15Q6UXA7 325 aaPredicted RBP19.66■□□□□ 0.74
GTF3A-202ENST00000419181 UNC5BQ8IZJ1 945 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.66■□□□□ 0.74
GTF3A-202ENST00000419181 GALNT6Q8NCL4 622 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 OR8K5Q8NH50 307 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 CFAP61Q8NHU2 1237 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 FLVCR1-AS1Q8TAF5 88 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 GSDMBQ8TAX9 411 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 KIAA1143Q96AT1 154 aaPredicted RBP19.66■□□□□ 0.74
GTF3A-202ENST00000419181 TRAPPC9Q96Q05 1148 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 OR2A14Q96R47 310 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 TRIM51Q9BSJ1 452 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 SLC12A9Q9BXP2 914 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 GPN2Q9H9Y4 310 aaPredicted RBP19.66■□□□□ 0.74
GTF3A-202ENST00000419181 LATS2Q9NRM7 1088 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 SPHK1Q9NYA1 384 aa19.66■□□□□ 0.74
GTF3A-202ENST00000419181 PIEZO2Q9H5I5 2752 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 TTI1O43156 1089 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 BANF1O75531 89 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 PRB1P04280 392 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 F7P08709 466 aaPredicted RBP19.65■□□□□ 0.74
GTF3A-202ENST00000419181 SPTBP11277 2137 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 PVRP15151 417 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 ATP5DP30049 168 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 SLC1A2P43004 574 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 CTBP1Q13363 440 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 CRYMQ14894 314 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 MORF4L2Q15014 288 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 CALML6Q8TD86 181 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 FAM136AQ96C01 138 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 WBP1Q96G27 269 aa19.65■□□□□ 0.74
GTF3A-202ENST00000419181 SLC45A3Q96JT2 553 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms