RNA–Protein interactions for RNA: ENST00000418664.2

DSP-202, Transcript of desmoplakin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DSP, Length 7,812 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-202ENST00000418664 PCDHA3Q9Y5H8 950 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PLEKHG2Q9H7P9 1386 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 C20orf202A1L168 122 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 SGPL1O95470 568 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 RENP00797 406 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 FGBP02675 491 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 ZNF17P17021 662 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 FXR1P51114 621 aaKnown RBP eCLIP11.61□□□□□ -0.55
DSP-202ENST00000418664 SLC18A2Q05940 514 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 CNPY1Q3B7I2 92 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PTCHD3Q3KNS1 767 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TMEM69Q5SWH9 247 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 SPATC1Q76KD6 591 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PYROXD2Q8N2H3 581 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 ZNF286AQ9HBT8 521 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 COPZ2Q9P299 210 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 DNAJB4Q9UDY4 337 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PUS1Q9Y606 427 aaKnown RBP eCLIP11.61□□□□□ -0.55
DSP-202ENST00000418664 WASF2Q9Y6W5 498 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 MTMR11A4FU01 709 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 A8MUI8 341 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 CATP04040 527 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 PNPLA4P41247 253 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PRKCIP41743 596 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 ILF2Q12905 390 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 NOXRED1Q6NXP6 359 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 ARCQ7LC44 396 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PTERQ96BW5 349 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 DAZAP1Q96EP5 407 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 KCTD7Q96MP8 289 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 CDK5RAP1Q96SZ6 601 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 TM9SF2Q99805 663 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PPIL3Q9H2H8 161 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 ACSL6Q9UKU0 697 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3DA0A087WVF3 549 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3IA0A087WXS9 549 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3EA0A087X179 549 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3KA0A087X1G2 549 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3FA6NER0 549 aaPredicted RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3LB9A6J9 549 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3HP0C7X1 549 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 RPL3P39023 403 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 TGM4P49221 684 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 CLINT1Q14677 625 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PTPRNQ16849 979 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 HES5Q5TA89 166 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3GQ6DHY5 549 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3CQ6IPX1 549 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TTLL10Q6ZVT0 673 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 DNAAF5Q86Y56 855 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TBC1D3Q8IZP1 549 aaPredicted RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 PIWIL1Q96J94 861 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 FPGTO14772 594 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 CHRM1P11229 460 aaPredicted RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 CD36P16671 472 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TUBP50607 506 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 P2RX1P51575 399 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 SLC10A1Q14973 349 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 LILRB2Q8N423 598 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 SCRN2Q96FV2 425 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TMEM41AQ96HV5 264 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PPP3R2Q96LZ3 170 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 ADAD1Q96M93 576 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 AARSD1Q9BTE6 412 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 TESMINQ9Y4I5 508 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 SYNJ2O15056 1496 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 NUMA1Q14980 2115 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 XYLBO75191 536 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 SRGNP10124 158 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PRPH2P23942 346 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 SNU13P55769 128 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 FAM135BQ49AJ0 1406 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TAPT1Q6NXT6 567 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 KCNT2Q6UVM3 1135 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 MARCH9Q86YJ5 346 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PDZD9Q8IXQ8 264 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 FBXO25Q8TCJ0 367 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 GTF2IRD1Q9UHL9 959 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 POLHQ9Y253 713 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 TNPO3Q9Y5L0 923 aaKnown RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 TIMM13Q9Y5L4 95 aaPredicted RBP11.61□□□□□ -0.55
DSP-202ENST00000418664 ANKRD12Q6UB98 2062 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 PNPLA7Q6ZV29 1317 aa11.61□□□□□ -0.55
DSP-202ENST00000418664 LRP5LA4QPB2 252 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 ZNF99A8MXY4 864 aaPredicted RBP11.6□□□□□ -0.55
DSP-202ENST00000418664 hCG_2039718K7EN88 272 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 CYTIPO60759 359 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 CYP2E1P05181 493 aaPredicted RBP11.6□□□□□ -0.55
DSP-202ENST00000418664 SLC35G4P0C7Q5 338 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 CD247P20963 164 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 CHATP28329 748 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 TSFMP43897 325 aaKnown RBP11.6□□□□□ -0.55
DSP-202ENST00000418664 CRKLP46109 303 aaKnown RBP11.6□□□□□ -0.55
DSP-202ENST00000418664 PTTG1IPP53801 180 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 PIN1Q13526 163 aaPredicted RBP11.6□□□□□ -0.55
DSP-202ENST00000418664 PPA1Q15181 289 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 SEC23AQ15436 765 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 DUPD1Q68J44 220 aa11.6□□□□□ -0.55
DSP-202ENST00000418664 PTGR2Q8N8N7 351 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms