RNA–Protein interactions for RNA: ENST00000418170.5

HMGXB4-202, Transcript of HMG-box containing 4, humanhuman

TSL 1 (best)

Gene HMGXB4, Length 4,216 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-202ENST00000418170 PDPK1O15530 556 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ARHGEF9O43307 516 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 HCRTO43612 131 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 DFNA5O60443 496 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 RECQL5O94762 991 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 IL1RNP18510 177 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 UBA1P22314 1058 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 UQCRC1P31930 480 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 NRIP1P48552 1158 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CD83Q01151 205 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF33AQ06730 810 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ELP6Q0PNE2 266 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 KYAT1Q16773 422 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 GPR149Q86SP6 731 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CCDC71Q8IV32 467 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 RYBPQ8N488 228 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 TTC29Q8NA56 475 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 FNDC5Q8NAU1 212 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 TBC1D20Q96BZ9 403 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ZNF419Q96HQ0 510 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CEP19Q96LK0 163 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 TRNT1Q96Q11 434 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 BARD1Q99728 777 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 COPS4Q9BT78 406 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 RASSF1Q9NS23 344 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ABI2Q9NYB9 513 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 OR6C70A6NIJ9 312 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 TRIM77I1YAP6 450 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 IFRD1O00458 451 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 UROSP10746 265 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ENPP1P22413 925 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CBLP22681 906 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 IL1RL1Q01638 556 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 STXBP2Q15833 593 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 RAP1GAP2Q684P5 730 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 RANBP10Q6VN20 620 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CREB3L2Q70SY1 520 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 GLB1L3Q8NCI6 653 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC2A14Q8TDB8 520 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 APH1BQ8WW43 257 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 TEX13BQ9BXU2 312 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 BEX2Q9BXY8 128 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ACTL8Q9H568 366 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 GLOD4Q9HC38 313 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ASAH2Q9NR71 780 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 PRMT7Q9NVM4 692 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 POLHQ9Y253 713 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CFL2Q9Y281 166 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 KLHL20Q9Y2M5 609 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 SOWAHBA6NEL2 793 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 MUSKO15146 869 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 TLL1O43897 1013 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 PCDHGA12O60330 932 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ALPPP05187 535 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 EPHA2P29317 976 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 HOXA9P31269 272 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 TNFSF8P32971 234 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 GZMKP49863 264 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 GEMP55040 296 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 YWHAHQ04917 246 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CYP4F3Q08477 520 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 FBXO43Q4G163 708 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 KIAA1614Q5VZ46 1190 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 SDE2Q6IQ49 451 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 SCIMPQ6UWF3 145 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CYP4Z2PQ8N1L4 340 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 BLOC1S5Q8TDH9 187 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 DEDD2Q8WXF8 326 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 DNASE1L2Q92874 299 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 UBE2FQ969M7 185 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 SLC2A13Q96QE2 648 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 FSD1LQ9BXM9 530 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 HEBP1Q9NRV9 189 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 A0A075B6Q4 140 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 A0A096LPI6 279 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 PAPSS2O95340 614 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 S1PR4O95977 384 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 F9P00740 461 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 FDXRP22570 491 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 C21orf33P30042 268 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 MAGEA2P43356 314 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 DGKQP52824 942 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 POU6F2P78424 691 aaPredicted RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 ARMCX4Q5H9R4 360 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 HABP4Q5JVS0 413 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 PXDC1Q5TGL8 231 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 DCAF15Q66K64 600 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 TIGD3Q6B0B8 471 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CEP68Q76N32 757 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 GALNT6Q8NCL4 622 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 REPS2Q8NFH8 660 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 OR10T2Q8NGX3 314 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 CELF6Q96J87 481 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 PITX2Q99697 317 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 THUMPD3Q9BV44 507 aaKnown RBP7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 C1QTNF7Q9BXJ2 289 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 UCK2Q9BZX2 261 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 MMP28Q9H239 520 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 IKZF5Q9H5V7 419 aa7.86□□□□□ -1.15
HMGXB4-202ENST00000418170 C3orf14Q9HBI5 128 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms