RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 ITGALP20701 1170 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 SHMT2P34897 504 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 ZNF140P52738 457 aaPredicted RBP14.85□□□□□ -0.03
DDX56-202ENST00000415758 PER3P56645 1201 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 PRKG2Q13237 762 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 NKAIN1Q4KMZ8 207 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 C1orf189Q5VU69 101 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 KAZNQ674X7 775 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 ZNF449Q6P9G9 518 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 HOOK3Q86VS8 718 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 SRRM1Q8IYB3 904 aaKnown RBP14.85□□□□□ -0.03
DDX56-202ENST00000415758 OR13C4Q8NGS5 318 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 FLVCR1-AS1Q8TAF5 88 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 WDR77Q9BQA1 342 aaPredicted RBP14.85□□□□□ -0.03
DDX56-202ENST00000415758 FICDQ9BVA6 458 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 ZDHHC3Q9NYG2 299 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 DHCR7Q9UBM7 475 aaKnown RBP14.85□□□□□ -0.03
DDX56-202ENST00000415758 ICKQ9UPZ9 632 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 AAR2Q9Y312 384 aaKnown RBP14.85□□□□□ -0.03
DDX56-202ENST00000415758 HYOU1Q9Y4L1 999 aa14.85□□□□□ -0.03
DDX56-202ENST00000415758 hCG_1818297A0A087WSY0 165 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 MASP2O00187 686 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 E2F3O00716 465 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 LRRTM2O43300 516 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 SPOPO43791 374 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 ONECUT2O95948 504 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 TNNT1P13805 278 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 UGT2B7P16662 529 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 MMP11P24347 488 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 TSFMP43897 325 aaKnown RBP14.84□□□□□ -0.03
DDX56-202ENST00000415758 GCGRP47871 477 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 ZRSR2Q15696 482 aaKnown RBP14.84□□□□□ -0.03
DDX56-202ENST00000415758 CYP2A13Q16696 494 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 ITPRIPL1Q6GPH6 555 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 CAVIN1Q6NZI2 390 aaKnown RBP14.84□□□□□ -0.03
DDX56-202ENST00000415758 UNC5AQ6ZN44 842 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 DNAJC22Q8N4W6 341 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 ANP32EQ9BTT0 268 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 HGH1Q9BTY7 390 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 FAM96AQ9H5X1 160 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 ARNT2Q9HBZ2 717 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 SLC22A11Q9NSA0 550 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 OR6C2Q9NZP2 312 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 IFNKQ9P0W0 207 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 INTUQ9ULD6 942 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 NOVA2Q9UNW9 492 aaKnown RBP14.84□□□□□ -0.03
DDX56-202ENST00000415758 CSAG2Q9Y5P2 127 aa14.84□□□□□ -0.03
DDX56-202ENST00000415758 ANKRD17O75179 2603 aaKnown RBP14.83□□□□□ -0.03
DDX56-202ENST00000415758 SNRNP200O75643 2136 aaKnown RBP14.83□□□□□ -0.04
DDX56-202ENST00000415758 H7C0S8 307 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 ZRANB2O95218 330 aaKnown RBP eCLIP14.83□□□□□ -0.04
DDX56-202ENST00000415758 CTSBP07858 339 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 CHRM5P08912 532 aaPredicted RBP14.83□□□□□ -0.04
DDX56-202ENST00000415758 EDN3P14138 238 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 PRF1P14222 555 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 POU3F2P20265 443 aaPredicted RBP14.83□□□□□ -0.04
DDX56-202ENST00000415758 ITGA3P26006 1051 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 ACRV1P26436 265 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 ACADLP28330 430 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 RBL1P28749 1068 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 PRAMEF13Q5VWM6 474 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 B3GNTL1Q67FW5 361 aaPredicted RBP14.83□□□□□ -0.04
DDX56-202ENST00000415758 DENND5AQ6IQ26 1287 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 TRIM73Q86UV7 250 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 TMEM151BQ8IW70 566 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 KATNAL2Q8IYT4 538 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 RCOR2Q8IZ40 523 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 ZNF655Q8N720 491 aaPredicted RBP14.83□□□□□ -0.04
DDX56-202ENST00000415758 GRHL3Q8TE85 626 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 FAR1Q8WVX9 515 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 MARVELD3Q96A59 401 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 CHP1Q99653 195 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 APOL2Q9BQE5 337 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 TXLNGQ9NUQ3 528 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 ZNHIT6Q9NWK9 470 aaKnown RBP14.83□□□□□ -0.04
DDX56-202ENST00000415758 SPHK1Q9NYA1 384 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 POLG2Q9UHN1 485 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 ALG6Q9Y672 507 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 OTOGQ6ZRI0 2925 aa14.83□□□□□ -0.04
DDX56-202ENST00000415758 SVILO95425 2214 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 A0A0J9YY10 115 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 APOC4-APOC2K7ER74 178 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 LIN7AO14910 233 aaPredicted RBP14.82□□□□□ -0.04
DDX56-202ENST00000415758 APOC2P02655 101 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 ALBP02768 609 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 TPBGLP0DKB5 382 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 CDKN1CP49918 316 aaPredicted RBP14.82□□□□□ -0.04
DDX56-202ENST00000415758 HADHBP55084 474 aaKnown RBP14.82□□□□□ -0.04
DDX56-202ENST00000415758 FOXL2P58012 376 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 OLIG2Q13516 323 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 HIF1AQ16665 826 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 DEFB110Q30KQ9 67 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 AGAP7PQ5VUJ5 663 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 SP5Q6BEB4 398 aaPredicted RBP14.82□□□□□ -0.04
DDX56-202ENST00000415758 BBS12Q6ZW61 710 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 SERPINA9Q86WD7 417 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 TBC1D21Q8IYX1 336 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 CLDN19Q8N6F1 224 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 OR5AR1Q8NGP9 310 aa14.82□□□□□ -0.04
DDX56-202ENST00000415758 DNAJB14Q8TBM8 379 aa14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms