RNA–Protein interactions for RNA: ENST00000415294.2

LINC00343-202, long intergenic non-protein coding RNA 343, humanhuman

TSL 5 BASIC

Gene LINC00343, Length 1,320 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-202ENST00000415294 DNAAF4Q8WXU2 420 aa6.47□□□□□ -1.37
LINC00343-202ENST00000415294 TAAR8Q969N4 342 aa6.47□□□□□ -1.37
LINC00343-202ENST00000415294 GLT1D1Q96MS3 346 aa6.47□□□□□ -1.37
LINC00343-202ENST00000415294 ZMAT2Q96NC0 199 aaKnown RBP6.47□□□□□ -1.37
LINC00343-202ENST00000415294 DCLK3Q9C098 648 aa6.47□□□□□ -1.37
LINC00343-202ENST00000415294 GDE1Q9NZC3 331 aa6.47□□□□□ -1.37
LINC00343-202ENST00000415294 BCCIPQ9P287 314 aaKnown RBP eCLIP6.47□□□□□ -1.37
LINC00343-202ENST00000415294 AMACRQ9UHK6 382 aa6.47□□□□□ -1.37
LINC00343-202ENST00000415294 CCL27Q9Y4X3 112 aa6.47□□□□□ -1.37
LINC00343-202ENST00000415294 RALGAPA2Q2PPJ7 1873 aa6.46□□□□□ -1.37
LINC00343-202ENST00000415294 TMEM8BA6NDV4 472 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 HS3ST1O14792 307 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 MYBL1P10243 752 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 PSG1P11464 419 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 VPREB1P12018 145 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 HOXB2P14652 356 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 SUOXP51687 545 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 RAD23AP54725 363 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 SIRPAP78324 504 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 MVPQ14764 893 aaKnown RBP6.46□□□□□ -1.38
LINC00343-202ENST00000415294 ETFDHQ16134 617 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 CTF1Q16619 201 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 TCEAL5Q5H9L2 206 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 COLEC12Q5KU26 742 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 TYW3Q6IPR3 259 aaKnown RBP6.46□□□□□ -1.38
LINC00343-202ENST00000415294 FAM122CQ6P4D5 195 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 CCDC190Q86UF4 302 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 HM13Q8TCT9 377 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 OIT3Q8WWZ8 545 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 ARSGQ96EG1 525 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 HMCESQ96FZ2 354 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 EDEM3Q9BZQ6 932 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 SPRTNQ9H040 489 aaPredicted RBP6.46□□□□□ -1.38
LINC00343-202ENST00000415294 HYPKQ9NX55 129 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 ELOVL5Q9NYP7 299 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 IL17BQ9UHF5 180 aa6.46□□□□□ -1.38
LINC00343-202ENST00000415294 SYNRGQ9UMZ2 1314 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 COL11A1P12107 1806 aaPredicted RBP6.45□□□□□ -1.38
LINC00343-202ENST00000415294 CDK5RAP2Q96SN8 1893 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 ROBO3Q96MS0 1386 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 A0A0U1RQG5 324 aaPredicted RBP6.45□□□□□ -1.38
LINC00343-202ENST00000415294 LOC730098B7Z3J9 87 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 KCNN4O15554 427 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 NDUFS7O75251 213 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 C21orf33P30042 268 aaPredicted RBP6.45□□□□□ -1.38
LINC00343-202ENST00000415294 BDKRB2P30411 391 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 RFX5P48382 616 aaPredicted RBP6.45□□□□□ -1.38
LINC00343-202ENST00000415294 BACE1P56817 501 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 ALCAMQ13740 583 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 TMEM198Q66K66 360 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 C11orf87Q6NUJ2 197 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 PAPD4Q6PIY7 484 aaKnown RBP6.45□□□□□ -1.38
LINC00343-202ENST00000415294 SLC36A4Q6YBV0 504 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 CCDC186Q7Z3E2 898 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 DEFB128Q7Z7B8 93 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 BEST3Q8N1M1 668 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 NRACQ8N912 160 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 MRPL38Q96DV4 380 aaKnown RBP6.45□□□□□ -1.38
LINC00343-202ENST00000415294 CFAP57Q96MR6 1250 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 TGS1Q96RS0 853 aaKnown RBP6.45□□□□□ -1.38
LINC00343-202ENST00000415294 CCDC106Q9BWC9 280 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 SF3B5Q9BWJ5 86 aaKnown RBP6.45□□□□□ -1.38
LINC00343-202ENST00000415294 DNAJC18Q9H819 358 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 PCDH9Q9HC56 1237 aa6.45□□□□□ -1.38
LINC00343-202ENST00000415294 A0A0U1RQJ8 604 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 A0A1B0GUL7 405 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 TRBC2A0A5B9 178 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 WDR91A4D1P6 747 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 MAGEB17A8MXT2 336 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 TNFRSF13BO14836 293 aaPredicted RBP6.44□□□□□ -1.38
LINC00343-202ENST00000415294 PLRG1O43660 514 aaKnown RBP6.44□□□□□ -1.38
LINC00343-202ENST00000415294 TBX10O75333 385 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 ASGR1P07306 291 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 QDPRP09417 244 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 NR2F2P24468 414 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 CLCNKAP51800 687 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 SPOCK1Q08629 439 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 TDRD12Q587J7 1177 aaKnown RBP6.44□□□□□ -1.38
LINC00343-202ENST00000415294 IGSF11Q5DX21 431 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 DUS1LQ6P1R4 473 aaKnown RBP6.44□□□□□ -1.38
LINC00343-202ENST00000415294 CHST3Q7LGC8 479 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 TMCO2Q7Z6W1 182 aaPredicted RBP6.44□□□□□ -1.38
LINC00343-202ENST00000415294 RPAINQ86UA6 219 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 FOXRED2Q8IWF2 684 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 PCDH20Q8N6Y1 951 aaKnown RBP6.44□□□□□ -1.38
LINC00343-202ENST00000415294 SLC38A9Q8NBW4 561 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 TET1Q8NFU7 2136 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 OR14A16Q8NHC5 309 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 THAP6Q8TBB0 222 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 FAM216AQ8WUB2 273 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 LPGAT1Q92604 370 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 ORAI1Q96D31 301 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 TXNDC15Q96J42 360 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 SLC25A33Q9BSK2 321 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 KCNK15Q9H427 330 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 SH3GLB2Q9NR46 395 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 MCM9Q9NXL9 1143 aa6.44□□□□□ -1.38
LINC00343-202ENST00000415294 ATG2AQ2TAZ0 1938 aa6.43□□□□□ -1.38
LINC00343-202ENST00000415294 ZNFX1Q9P2E3 1918 aaKnown RBP6.43□□□□□ -1.38
LINC00343-202ENST00000415294 LINC01553A4QN01 128 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms