RNA–Protein interactions for RNA: ENST00000414978.5

MCF2-204, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,813 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-204ENST00000414978 SPACA9Q96E40 222 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 EPSTI1Q96J88 318 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ADAM2Q99965 735 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ZNF559Q9BR84 538 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 EFHD1Q9BUP0 239 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 NUP85Q9BW27 656 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TMEM39BQ9GZU3 492 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 SFXN1Q9H9B4 322 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 OLAHQ9NV23 265 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 DBF4Q9UBU7 674 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 ADAMTS5Q9UNA0 930 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 FZD1Q9UP38 647 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 RPH3AQ9Y2J0 694 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 GOLGB1Q14789 3259 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 FOXO6A8MYZ6 492 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 KLRF2D3W0D1 207 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 H0YIG0 161 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 BIN1O00499 593 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 SOCS6O14544 535 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CTDSPLO15194 276 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ATP6V1G1O75348 118 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ADRB1P08588 477 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TCF4P15884 667 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ZNF8P17098 575 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 TMEM11P17152 192 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 MMP8P22894 467 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 RDXP35241 583 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 SOX6P35712 828 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 IFNAR2P48551 515 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 PPP2CBP62714 309 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 PPP2CAP67775 309 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 PMPCAQ10713 525 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 AIMP2Q13155 320 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 RPE65Q16518 533 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 APOBEC3HQ6NTF7 200 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 TMEM88Q6PEY1 159 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 MOXD1Q6UVY6 613 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 SLC36A4Q6YBV0 504 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 DGLUCYQ7Z3D6 616 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ARHGAP22Q7Z5H3 698 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 SPATA19Q7Z5L4 167 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 GPR142Q7Z601 462 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CUZD1Q86UP6 607 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TRIM74Q86UV6 250 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TRIM73Q86UV7 250 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 DENND6AQ8IWF6 608 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 BANPQ8N9N5 519 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 SLC44A5Q8NCS7 719 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 GPRC5AQ8NFJ5 357 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 MSI2Q96DH6 328 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 EDC3Q96F86 508 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 KLHL5Q96PQ7 755 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 GSDMAQ96QA5 445 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 RAB3IPQ96QF0 476 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 FCRL5Q96RD9 977 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 DPH5Q9H2P9 285 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CUEDC2Q9H467 287 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 MINDY3Q9H8M7 445 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 DUSP22Q9NRW4 184 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 DNAJC11Q9NVH1 559 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 SEMA5BQ9P283 1151 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 KLHL9Q9P2J3 617 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ZMAT5Q9UDW3 170 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 IL19Q9UHD0 177 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 UTS2RQ9UKP6 389 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 PLXNA4Q9HCM2 1894 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ARID2Q68CP9 1835 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 WDR81Q562E7 1941 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 A0A1W2PS29 197 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CLRN2A0PK11 232 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CBY3A6NI87 242 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 A8MVJ9 347 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 PLK4O00444 970 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 PTGESO14684 152 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 SLC16A5O15375 505 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 OGG1O15527 345 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 MITFO75030 526 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 CABYRO75952 493 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 AKAP3O75969 853 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 AKR7A3O95154 331 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 HEXBP07686 556 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 KRT19P08727 400 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 IQCF3P0C7M6 154 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ZNF182P17025 639 aaPredicted RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 DRD4P21917 467 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 OAZ1P54368 228 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 AKAP17AQ02040 695 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 ITIH3Q06033 890 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 FUT7Q11130 342 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 MAPK11Q15759 364 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TCTN1Q2MV58 587 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 NAA35Q5VZE5 725 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ASCL5Q7RTU5 278 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 CCDC186Q7Z3E2 898 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 BCDIN3DQ7Z5W3 292 aaKnown RBP2.52□□□□□ -2.01
MCF2-204ENST00000414978 AMER2Q8N7J2 671 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TERB1Q8NA31 727 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 ASB10Q8WXI3 467 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 NT5C3BQ969T7 300 aa2.52□□□□□ -2.01
MCF2-204ENST00000414978 TEKT1Q969V4 418 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms