RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 PPT2Q9UMR5 302 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 ZNF711Q9Y462 761 aa15.14■□□□□ 0.01
CPNE1-208ENST00000414711 C2orf74A8MZ97 194 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 E9PLN8 166 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 FAM227AF5H4B4 570 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 WDPCPO95876 746 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 ALBP02768 609 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 HLA-DQB2P05538 268 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 INHBBP09529 407 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 PRKCSHP14314 528 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-208ENST00000414711 ACPPP15309 386 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 ABOP16442 354 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 DNASE1P24855 282 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 GSE1Q14687 1217 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 HSP90AA4PQ58FG1 418 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 C3P1Q6ZMU1 363 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 HOOK3Q86VS8 718 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 CSPG4P5Q96PW8 444 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 VKORC1Q9BQB6 163 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 GPR63Q9BZJ6 419 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 TSPAN10Q9H1Z9 355 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-208ENST00000414711 SLC26A1Q9H2B4 701 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 HSD3B7Q9H2F3 369 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 NLRC4Q9NPP4 1024 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 SEPT11Q9NVA2 429 aaKnown RBP15.13■□□□□ 0.01
CPNE1-208ENST00000414711 FAM8A1Q9UBU6 413 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 CTSFQ9UBX1 484 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 LIMA1Q9UHB6 759 aaKnown RBP15.13■□□□□ 0.01
CPNE1-208ENST00000414711 AMACRQ9UHK6 382 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 PLEKHA6Q9Y2H5 1048 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 DNMT3AQ9Y6K1 912 aaPredicted RBP15.13■□□□□ 0.01
CPNE1-208ENST00000414711 VPS13CQ709C8 3753 aa15.13■□□□□ 0.01
CPNE1-208ENST00000414711 A0A1B0GX78 115 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 MAP2K7O14733 419 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 RNF8O76064 485 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 ZRANB2O95218 330 aaKnown RBP eCLIP15.12■□□□□ 0.011e-6■■□□□ 12.9
CPNE1-208ENST00000414711 MLYCDO95822 493 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 PRR35P0CG20 571 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 MYBL2P10244 700 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 ALAS2P22557 587 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 FDXRP22570 491 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 MSX1P28360 303 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 SOX5P35711 763 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 CD86P42081 329 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 TFF3Q07654 80 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 ZIC1Q15915 447 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 DPYSL2Q16555 572 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 SLC5A12Q1EHB4 618 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 KRTCAP3Q53RY4 240 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 HIBCHQ6NVY1 386 aaPredicted RBP15.12■□□□□ 0.01
CPNE1-208ENST00000414711 TMEM220Q6QAJ8 160 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 SPESP1Q6UW49 350 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 COX15Q7KZN9 410 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 POLNQ7Z5Q5 900 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 TRIM73Q86UV7 250 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 LRRC49Q8IUZ0 686 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 EID3Q8N140 333 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 WFDC11Q8NEX6 87 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 NRTNQ99748 197 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 RNF32Q9H0A6 362 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 ACTR10Q9NZ32 417 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 ACSL5Q9ULC5 683 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 HEBP2Q9Y5Z4 205 aa15.12■□□□□ 0.01
CPNE1-208ENST00000414711 HCFC1P51610 2035 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 NKX2-6A6NCS4 301 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 FAM90A27PA6NNH2 459 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 ADAM10O14672 748 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 PROM1O43490 865 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 SERPINC1P01008 464 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 PIM1P11309 404 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-208ENST00000414711 ATP1A3P13637 1013 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 KRT31Q15323 416 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 FILIP1LQ4L180 1135 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 TIGD7Q6NT04 549 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-208ENST00000414711 TAB3Q8N5C8 712 aaPredicted RBP15.11■□□□□ 0.01
CPNE1-208ENST00000414711 DLG3Q92796 817 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.11■□□□□ 0.012e-6■■■■■ 26.8
CPNE1-208ENST00000414711 CRB3Q9BUF7 120 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 XPO4Q9C0E2 1151 aaKnown RBP15.11■□□□□ 0.01
CPNE1-208ENST00000414711 MAGEE1Q9HCI5 957 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 ZNF358Q9NW07 568 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 LUC7L2Q9Y383 392 aaKnown RBP15.11■□□□□ 0.01
CPNE1-208ENST00000414711 CPAMD8Q8IZJ3 1885 aa15.11■□□□□ 0.01
CPNE1-208ENST00000414711 OR5H15A6NDH6 313 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 MGAT4DA6NG13 374 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 LRRC10BA6NIK2 292 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 PES1O00541 588 aaKnown RBP15.1■□□□□ 0.01
CPNE1-208ENST00000414711 MATN3O15232 486 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 GPR39O43194 453 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 TSPAN12O95859 305 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 MMP2P08253 660 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 HOXD4P09016 255 aaPredicted RBP15.1■□□□□ 0.01
CPNE1-208ENST00000414711 DGKQP52824 942 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 MAMLD1Q13495 774 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 SYCP1Q15431 976 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 LDLRAP1Q5SW96 308 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 FNBP1LQ5T0N5 605 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 TTLL10Q6ZVT0 673 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 DOLPP1Q86YN1 238 aa15.1■□□□□ 0.01
CPNE1-208ENST00000414711 C8orf44Q96CB5 159 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms