RNA–Protein interactions for RNA: ENST00000414700.7

SHMT2-202, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 2,006 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-202ENST00000414700 PCED1AQ9H1Q7 454 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 MMADHCQ9H3L0 296 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-202ENST00000414700 CARS2Q9HA77 564 aaKnown RBP15.17■□□□□ 0.02
SHMT2-202ENST00000414700 UTP6Q9NYH9 597 aaKnown RBP15.17■□□□□ 0.02
SHMT2-202ENST00000414700 KLHL42Q9P2K6 505 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 TP53BP1Q12888 1972 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-202ENST00000414700 CACNA1EQ15878 2313 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 GPR89AB7ZAQ6 455 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 UBXN8O00124 270 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 KPNA5O15131 536 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 GSC2O15499 205 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 DLX3O60479 287 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 GPR89BP0CG08 455 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 CPA3P15088 417 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 HTR1BP28222 390 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 MAGEA8P43361 318 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 HK3P52790 923 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 ATP6V0D1P61421 351 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 YPEL5P62699 121 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 PHKG1Q16816 387 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 ZNF542PQ5EBM4 170 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 FBXO48Q5FWF7 155 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 MYO1HQ8N1T3 1032 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 PTCD3Q96EY7 689 aaKnown RBP15.17■□□□□ 0.02
SHMT2-202ENST00000414700 SCARF2Q96GP6 870 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-202ENST00000414700 DUSP15Q9H1R2 295 aaPredicted RBP15.17■□□□□ 0.02
SHMT2-202ENST00000414700 TFB2MQ9H5Q4 396 aaKnown RBP15.17■□□□□ 0.02
SHMT2-202ENST00000414700 GPR27Q9NS67 375 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 KLF15Q9UIH9 416 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 ANGPTL2Q9UKU9 493 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 KCNK6Q9Y257 313 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 GPSM3Q9Y4H4 160 aa15.17■□□□□ 0.02
SHMT2-202ENST00000414700 C17orf113A0A1B0GUU1 675 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 NCF1BA6NI72 391 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 NCF1CA8MVU1 366 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 KMOO15229 486 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 RBP1P09455 135 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 UBTFL6P0CB48 400 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 CBSLP0DN79 551 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 NCF1P14598 390 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 BGNP21810 368 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 ITPKAP23677 461 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 RPL10P27635 214 aaKnown RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 CBSP35520 551 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 LSAMPQ13449 338 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 MYBPC3Q14896 1274 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 PPP1R3AQ16821 1122 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 ALG11Q2TAA5 492 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 MTDHQ86UE4 582 aaKnown RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 GALNT13Q8IUC8 556 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 OXR1Q8N573 874 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 CCL4L1Q8NHW4 92 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 RHEBL1Q8TAI7 183 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 MIPOL1Q8TD10 442 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 FAM126AQ9BYI3 521 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 TCEAL2Q9H3H9 227 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 TM9SF3Q9HD45 589 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 C11orf16Q9NQ32 467 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 RNF112Q9ULX5 631 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 PSMD13Q9UNM6 376 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 TNRC6BQ9UPQ9 1833 aaKnown RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 SPTY2D1-AS1A0A0U1RR47 76 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 A0A1W2PR77 199 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 F8W8V4 182 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 ZSCAN9O15535 394 aaPredicted RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 HRO43593 1189 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 TROVE2P10155 538 aaKnown RBP eCLIP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 AVPR2P30518 371 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 NUDT1P36639 197 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 KPNA2P52292 529 aaKnown RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 ABRQ12979 859 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 FZD2Q14332 565 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 ZYG11AQ6WRX3 759 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 NUDCD3Q8IVD9 361 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 KBTBD2Q8IY47 623 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 SLC22A15Q8IZD6 547 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 RGL4Q8IZJ4 473 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 STAG3L4Q8TBR4 150 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 HM13Q8TCT9 377 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 GLMNQ92990 594 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 MCUR1Q96AQ8 359 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 PHF21BQ96EK2 531 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 TMEM168Q9H0V1 697 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 OCEL1Q9H607 264 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 SIRPGQ9P1W8 387 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 KLQ9UEF7 1012 aa15.16■□□□□ 0.02
SHMT2-202ENST00000414700 G3BP2Q9UN86 482 aaKnown RBP15.16■□□□□ 0.02
SHMT2-202ENST00000414700 CABIN1Q9Y6J0 2220 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 ZNF318Q5VUA4 2279 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 KMT2EQ8IZD2 1858 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 CACNA1HO95180 2353 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 A8MT66 165 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 H3BM21 787 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 GYG2O15488 501 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 KERAO60938 352 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 MYL2P10916 166 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 FGF3P11487 239 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-202ENST00000414700 ENO3P13929 434 aaPredicted RBP15.15■□□□□ 0.02
SHMT2-202ENST00000414700 KELP23276 732 aa15.15■□□□□ 0.02
SHMT2-202ENST00000414700 CD38P28907 300 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms