RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 TSPAN31Q12999 210 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PRKAA1Q13131 559 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 DMP1Q13316 513 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PPIGQ13427 754 aaKnown RBP eCLIP3.56□□□□□ -1.845e-11■□□□□ 10.3
SF3B1-203ENST00000414174 FGL2Q14314 439 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF273Q14593 569 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 MFSD13AQ14CX5 517 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 HEPACAMQ14CZ8 416 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SF1Q15637 639 aaKnown RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NPTX1Q15818 432 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CHRNA2Q15822 529 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ETFDHQ16134 617 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 UAP1Q16222 522 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 LSM12Q3MHD2 195 aaKnown RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SLC36A3Q495N2 470 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CERKLQ49MI3 558 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 EPC2Q52LR7 807 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TMEM177Q53S58 311 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PITRM1Q5JRX3 1037 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TOR2AQ5JU69 321 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 BEND3Q5T5X7 828 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 C6orf183Q5T699 404 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 C1orf146Q5VVC0 180 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 MLIPQ5VWP3 458 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 LIPNQ5VXI9 398 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ARL6IP4Q66PJ3 421 aaKnown RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 WBP2NLQ6ICG8 309 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SLFN12LQ6IEE8 588 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ANO7Q6IWH7 933 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 STYK1Q6J9G0 422 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SLC25A25Q6KCM7 469 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PMF1Q6P1K2 205 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NCEH1Q6PIU2 408 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ARSKQ6UWY0 536 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 KIAA0408Q6ZU52 694 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 KCNK18Q7Z418 384 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 VTCN1Q7Z7D3 282 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 LINC00523Q86TU6 105 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 YRDCQ86U90 279 aaKnown RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CUZD1Q86UP6 607 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 WDR5BQ86VZ2 330 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CDR2LQ86X02 465 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PPP1R3BQ86XI6 285 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TIGD4Q8IY51 512 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CFAP206Q8IYR0 622 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NAGSQ8N159 534 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 GUF1Q8N442 669 aaKnown RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TRAM1L1Q8N609 369 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SLC15A4Q8N697 577 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PCDH20Q8N6Y1 951 aaKnown RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 MB21D1Q8N884 522 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 RASGEF1AQ8N9B8 481 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF610Q8N9Z0 462 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 IL17RCQ8NAC3 791 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 KREMEN2Q8NCW0 462 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 C19orf18Q8NEA5 215 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 DDHD1Q8NEL9 900 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 OR5M1Q8NGP8 315 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PCDH19Q8TAB3 1148 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SCAMP5Q8TAC9 235 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 DNAJB14Q8TBM8 379 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF596Q8TC21 504 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TCP10LQ8TDR4 215 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CSGALNACT1Q8TDX6 532 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SNX19Q92543 992 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 LPGAT1Q92604 370 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ESR2Q92731 530 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 RAB1CQ92928 201 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 HAVCR1Q96D42 359 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ERLEC1Q96DZ1 483 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 RNFT2Q96EX2 444 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SLC41A3Q96GZ6 507 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ZNF48Q96MX3 618 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 DGAT2Q96PD7 388 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TAAR1Q96RJ0 339 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CYP2S1Q96SQ9 504 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 LBHD1Q9BQE6 289 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 FERMT1Q9BQL6 677 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NLNQ9BYT8 704 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 BCL2L14Q9BZR8 327 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NKX2-4Q9H2Z4 354 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SAV1Q9H4B6 383 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 FOLH1BQ9HBA9 442 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 ADAP2Q9NPF8 381 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 G6PC2Q9NQR9 355 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 TUBG2Q9NRH3 451 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 PANK4Q9NVE7 773 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 FAM118AQ9NWS6 357 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 CMTM6Q9NX76 183 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 P4HTMQ9NXG6 502 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 NDE1Q9NXR1 346 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 GDE1Q9NZC3 331 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SH3BP4Q9P0V3 963 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 COL20A1Q9P218 1284 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 KLHL8Q9P2G9 620 aaPredicted RBP3.56□□□□□ -1.84
SF3B1-203ENST00000414174 LRIT1Q9P2V4 623 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 HSFX1Q9UBD0 423 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 SLCO3A1Q9UIG8 710 aa3.56□□□□□ -1.84
SF3B1-203ENST00000414174 HAO1Q9UJM8 370 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms