RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 STAMBPL1Q96FJ0 436 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 C1GALT1Q9NS00 363 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 FGF21Q9NSA1 209 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 ACTR10Q9NZ32 417 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 CIDEBQ9UHD4 219 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 RARRES3Q9UL19 164 aa14.36□□□□□ -0.11
LIMS4-201ENST00000413601 LOC101059948A0A1B0GTJ6 334 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 PIPSLA2A3N6 862 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 KPNA5O15131 536 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 ATXN7O15265 892 aaPredicted RBP14.35□□□□□ -0.11
LIMS4-201ENST00000413601 ESR1P03372 595 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 PVRP15151 417 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 ST6GAL1P15907 406 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 CYP4F2P78329 520 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 ACY1Q03154 408 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 CTBP1Q13363 440 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.35□□□□□ -0.11
LIMS4-201ENST00000413601 PWWP2BQ6NUJ5 590 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 PCSK4Q6UW60 755 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 C6orf15Q6UXA7 325 aaPredicted RBP14.35□□□□□ -0.11
LIMS4-201ENST00000413601 HOOK3Q86VS8 718 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 DENND6AQ8IWF6 608 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 GALNT6Q8NCL4 622 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 GSDMBQ8TAX9 411 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 TRIM51Q9BSJ1 452 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 KLHL25Q9H0H3 589 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 GPN2Q9H9Y4 310 aaPredicted RBP14.35□□□□□ -0.11
LIMS4-201ENST00000413601 KCND1Q9NSA2 647 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 C20orf96Q9NUD7 363 aaPredicted RBP14.35□□□□□ -0.11
LIMS4-201ENST00000413601 SPHK1Q9NYA1 384 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 GALPQ9UBC7 116 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 LNPEPQ9UIQ6 1025 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 BTRCQ9Y297 605 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 LOC400499M0QZD8 3231 aa14.35□□□□□ -0.11
LIMS4-201ENST00000413601 CCDC188H7C350 402 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 ERVH48-1M5A8F1 160 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TTI1O43156 1089 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 RPN2P04844 631 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 CHRM5P08912 532 aaPredicted RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 CHRM3P20309 590 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 ADARP55265 1226 aaKnown RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TUBB4BP68371 445 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 DHX9Q08211 1270 aaKnown RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 ABHD18Q0P651 414 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TUBB2AQ13885 445 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 MAP7Q14244 749 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 LONRF1Q17RB8 773 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 MSS51Q4VC12 460 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TAF1BQ53T94 588 aaPredicted RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 PLEKHS1Q5SXH7 462 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TMTC4Q5T4D3 741 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 SPESP1Q6UW49 350 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 UNC5DQ6UXZ4 953 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 SYDE1Q6ZW31 735 aaPredicted RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TRIM73Q86UV7 250 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 ESX1Q8N693 406 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 SKA2Q8WVK7 121 aaPredicted RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TTC9Q92623 222 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 ZNF501Q96CX3 271 aaPredicted RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 RUNDC3BQ96NL0 473 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TRAPPC9Q96Q05 1148 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 OR2A14Q96R47 310 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TUBB2BQ9BVA1 445 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 SLC12A9Q9BXP2 914 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 PITPNM3Q9BZ71 974 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 FBXO6Q9NRD1 293 aaPredicted RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 INTS10Q9NVR2 710 aaKnown RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 OR6C2Q9NZP2 312 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 RNF14Q9UBS8 474 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 TSR3Q9UJK0 312 aaKnown RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 RUVBL2Q9Y230 463 aaKnown RBP14.34□□□□□ -0.11
LIMS4-201ENST00000413601 VPS9D1Q9Y2B5 631 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 NFS1Q9Y697 457 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 FAM169AQ9Y6X4 670 aa14.34□□□□□ -0.11
LIMS4-201ENST00000413601 H3BMM5 538 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 KDM1AO60341 852 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 NTRK1P04629 796 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 PKMP14618 531 aaKnown RBP14.33□□□□□ -0.12
LIMS4-201ENST00000413601 UGT2B7P16662 529 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 PGAM1P18669 254 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 PKLRP30613 574 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 STAT5AP42229 794 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 SLC1A2P43004 574 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 GRB7Q14451 532 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 KYNUQ16719 465 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 BBS9Q3SYG4 887 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 HSP90AA5PQ58FG0 334 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 HP1BP3Q5SSJ5 553 aaPredicted RBP14.33□□□□□ -0.12
LIMS4-201ENST00000413601 CNSTQ6PJW8 725 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 BPHLQ86WA6 291 aaPredicted RBP14.33□□□□□ -0.12
LIMS4-201ENST00000413601 IGDCC3Q8IVU1 814 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 DCUN1D3Q8IWE4 304 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 C2orf73Q8N5S3 287 aaPredicted RBP14.33□□□□□ -0.12
LIMS4-201ENST00000413601 LMNTD1Q8N9Z9 388 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 FLVCR1-AS1Q8TAF5 88 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 SLC39A7Q92504 469 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 KIAA1143Q96AT1 154 aaPredicted RBP14.33□□□□□ -0.12
LIMS4-201ENST00000413601 PWWP2AQ96N64 755 aa14.33□□□□□ -0.12
LIMS4-201ENST00000413601 FCRL4Q96PJ5 515 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms