RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 POLG2Q9UHN1 485 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 PYCARDQ9ULZ3 195 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 RUVBL2Q9Y230 463 aaKnown RBP9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 CDYLQ9Y232 598 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 NEU2Q9Y3R4 380 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 MAD1L1Q9Y6D9 718 aa9.86□□□□□ -0.83
NCKIPSD-202ENST00000413374 BPTFQ12830 3046 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 FAM208BQ5VWN6 2430 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 GOLGA6L10A0A0M3HER8 536 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 KRT87PA6NCN2 255 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 SDR42E2A6NKP2 422 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 TMEM150CB9EJG8 249 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 PYCARD-AS1I3L0S3 204 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 MAP3K7O43318 606 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 NIPSNAP2O75323 286 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 GPC4O75487 556 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 ITGB2P05107 769 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 CTSBP07858 339 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 FURINP09958 794 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 UGT2B7P16662 529 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 CHRM3P20309 590 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 SHMT2P34897 504 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 RPS18P62269 152 aaKnown RBP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 PLOD1Q02809 727 aaPredicted RBP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 DHX34Q14147 1143 aaKnown RBP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 MAP7Q14244 749 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 PPP1R7Q15435 360 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZIC1Q15915 447 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 DEFB110Q30KQ9 67 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 CCSMST1Q4G0I0 132 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 ANKRD20A4Q4UJ75 823 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZNF789Q5FWF6 425 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 LCN10Q6JVE6 187 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 MRNIPQ6NTE8 343 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 NEPROQ6NW34 567 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 CYB5D1Q6P9G0 228 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 BORAQ6PGQ7 559 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 SPESP1Q6UW49 350 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 CDHR3Q6ZTQ4 885 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 KLHL7Q8IXQ5 586 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 SLC22A15Q8IZD6 547 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 AGGF1Q8N302 714 aaeCLIP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 SLC38A9Q8NBW4 561 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 GSDMBQ8TAX9 411 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 ASZ1Q8WWH4 475 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 N4BP2L2Q92802 583 aaPredicted RBP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 MR1Q95460 341 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 ZNF669Q96BR6 464 aaPredicted RBP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 CLIP3Q96DZ5 547 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 SERPINB12Q96P63 405 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 OR2A14Q96R47 310 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 EFHD1Q9BUP0 239 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 SLC7A5P2Q9GIP4 190 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 SPRTNQ9H040 489 aaPredicted RBP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 DDX47Q9H0S4 455 aaKnown RBP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 MRM3Q9HC36 420 aaKnown RBP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 FAM60AQ9NP50 221 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 FBXO6Q9NRD1 293 aaPredicted RBP9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 GNPTGQ9UJJ9 305 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 NFS1Q9Y697 457 aa9.85□□□□□ -0.83
NCKIPSD-202ENST00000413374 CDC14CA4D256 554 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 CTAGE9A4FU28 777 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 MATN2O00339 956 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 HCRTR1O43613 425 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 BANF1O75531 89 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 MT-ND3P03897 115 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 PAMP19021 973 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 CYP2A7P20853 494 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 PEBP1P30086 187 aaKnown RBP9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 MAGEA6P43360 314 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 CCR10P46092 362 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 BDKRB1P46663 353 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 CDC20Q12834 499 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 GPS2Q13227 327 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 CTBP1Q13363 440 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 DNASE1L3Q13609 305 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 THOC5Q13769 683 aaKnown RBP9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 GRB7Q14451 532 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 TMED2Q15363 201 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 DNAJC21Q5F1R6 531 aaKnown RBP9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 HP1BP3Q5SSJ5 553 aaPredicted RBP9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 FAM69BQ5VUD6 431 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 CNSTQ6PJW8 725 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 OTOAQ7RTW8 1153 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 BPHLQ86WA6 291 aaPredicted RBP9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 PTRH1Q86Y79 214 aaKnown RBP9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 DENND6AQ8IWF6 608 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 NAT8LQ8N9F0 302 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 MCUQ8NE86 351 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 GRK7Q8WTQ7 553 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 LPGAT1Q92604 370 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 BIRC8Q96P09 236 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 PANX3Q96QZ0 392 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 TWSG1Q9GZX9 223 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 FANCEQ9HB96 536 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 C20orf96Q9NUD7 363 aaPredicted RBP9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 IRAK4Q9NWZ3 460 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 ASIC3Q9UHC3 531 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 SERTAD3Q9UJW9 196 aa9.84□□□□□ -0.83
NCKIPSD-202ENST00000413374 SLC39A10Q9ULF5 831 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms