RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 CST9Q5W186 159 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 ATG9BQ674R7 924 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 TRIM46Q7Z4K8 759 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 KLHL23Q8NBE8 558 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 CLHC1Q8NHS4 586 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 RHBDF1Q96CC6 855 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 FAM120BQ96EK7 910 aaKnown RBP18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 CEP295NLQ96MC4 621 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 NODALQ96S42 347 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 KAT8Q9H7Z6 458 aaKnown RBP18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 GKN1Q9NS71 199 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 ASIC5Q9NY37 505 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 TRPS1Q9UHF7 1281 aa18.61■□□□□ 0.57
TNFRSF8-202ENST00000413146 SERPINA1P01009 418 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 PRKACGP22612 351 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 CCND3P30281 292 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 RAD23AP54725 363 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 SPIDRQ14159 915 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ZNF691Q5VV52 312 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 SUSD1Q6UWL2 747 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 RGL4Q8IZJ4 473 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 FKBP10Q96AY3 582 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 MYO19Q96H55 970 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 CCDC90BQ9GZT6 254 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ASB8Q9H765 288 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 B3GNT3Q9Y2A9 372 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 FUOMA2VDF0 154 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 MANBAO00462 879 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 FZD6O60353 706 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 DNAJB5O75953 348 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 EBLN1P0CF75 366 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 PORP16435 677 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 HTR1BP28222 390 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 GGT5P36269 586 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 MLLT10P55197 1068 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ISL1P61371 349 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 SPCS2Q15005 226 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 RFX4Q33E94 735 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ATXN7L2Q5T6C5 722 aaPredicted RBP18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 TMEM179BQ7Z7N9 219 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ZBTB2Q8N680 514 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 CLDN19Q8N6F1 224 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ARL10Q8N8L6 244 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ARHGAP39Q9C0H5 1083 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 C1orf109Q9NX04 203 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ENPP5Q9UJA9 477 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ERGIC3Q9Y282 383 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 FCF1Q9Y324 198 aaKnown RBP18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 U3KQV3 271 aa18.6■□□□□ 0.57
TNFRSF8-202ENST00000413146 ZNF840PA6NDX5 716 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 PTGES3LE9PB15 166 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 BCAS1O75363 584 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 SULT1C4O75897 302 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 RECQL5O94762 991 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 EPB42P16452 691 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 ITIH1P19827 911 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 ITGALP20701 1170 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 SLC11A1P49279 550 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 FLT3LGP49771 235 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 IL18R1Q13478 541 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 DPY19L1Q2PZI1 675 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 ARMC12Q5T9G4 340 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 PRSS55Q6UWB4 352 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 SLC16A12Q6ZSM3 486 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 ANKS3Q6ZW76 656 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 HIPK1Q86Z02 1210 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 ABHD11Q8NFV4 315 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 DNAJB8Q8NHS0 232 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 FRS2Q8WU20 508 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 UBTD2Q8WUN7 234 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 NTMT1Q9BV86 223 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 PCDHB14Q9Y5E9 798 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 PRSS21Q9Y6M0 314 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 DGKBQ9Y6T7 804 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 TRBV5-3A0A0A0MS03 114 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 LOC730098B7Z3J9 87 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 BCKDKO14874 412 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 ERN1O75460 977 aaKnown RBP18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 HOXB6P17509 224 aaKnown RBP18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 NR4A1P22736 598 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 CST5P28325 142 aaPredicted RBP18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 CCR3P51677 355 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 AQP6Q13520 282 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 USP39Q53GS9 565 aaKnown RBP18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 LAIR2Q6ISS4 152 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 TRAF7Q6Q0C0 670 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 LRRC8DQ7L1W4 858 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 DET1Q7L5Y6 550 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 SNX20Q7Z614 316 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 PAF1Q8N7H5 531 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 POP5Q969H6 163 aaKnown RBP18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 DOLKQ9UPQ8 538 aa18.59■□□□□ 0.57
TNFRSF8-202ENST00000413146 NT5C1B-RDH14C9J2C7 533 aa18.58■□□□□ 0.56
TNFRSF8-202ENST00000413146 FUCA1P04066 466 aa18.58■□□□□ 0.56
TNFRSF8-202ENST00000413146 BCKDHAP12694 445 aa18.58■□□□□ 0.56
TNFRSF8-202ENST00000413146 MZF1P28698 734 aaPredicted RBP18.58■□□□□ 0.56
TNFRSF8-202ENST00000413146 BCAP31P51572 246 aa18.58■□□□□ 0.56
TNFRSF8-202ENST00000413146 FCGRTP55899 365 aa18.58■□□□□ 0.56
TNFRSF8-202ENST00000413146 GSTM4Q03013 218 aa18.58■□□□□ 0.56
TNFRSF8-202ENST00000413146 OCA2Q04671 838 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms