RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 TMEM102Q8N9M5 508 aaPredicted RBP13.28□□□□□ -0.28
LIMS1-205ENST00000410093 L3MBTL4Q8NA19 623 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 OR8J3Q8NGG0 315 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 BTN2A2Q8WVV5 523 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 GLMNQ92990 594 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 TMEM125Q96AQ2 219 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 NECAB3Q96P71 396 aaPredicted RBP13.28□□□□□ -0.28
LIMS1-205ENST00000410093 COPS7BQ9H9Q2 264 aaPredicted RBP13.28□□□□□ -0.28
LIMS1-205ENST00000410093 PCDH12Q9NPG4 1184 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 MAPRE3Q9UPY8 281 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 PDE10AQ9Y233 779 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 CCL27Q9Y4X3 112 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 ASB1Q9Y576 335 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 SNX13Q9Y5W8 968 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 WNT6Q9Y6F9 365 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 DOCK6Q96HP0 2047 aa13.28□□□□□ -0.28
LIMS1-205ENST00000410093 REV3LO60673 3130 aa13.27□□□□□ -0.28
LIMS1-205ENST00000410093 TCF20Q9UGU0 1960 aaKnown RBP13.27□□□□□ -0.28
LIMS1-205ENST00000410093 A8MX80 341 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 MANBAO00462 879 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 PER2O15055 1255 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 RSL1D1O76021 490 aaKnown RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 CYP17A1P05093 508 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 LYNP07948 512 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 C7P10643 843 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 BMP2P12643 396 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 TCN1P20061 433 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 CA5AP35218 305 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 IRS1P35568 1242 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 MMP12P39900 470 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 ZFP36L2P47974 494 aaKnown RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 SLC6A12P48065 614 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 AQP4P55087 323 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 UFM1P61960 85 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 PLOD1Q02809 727 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 FOLH1Q04609 750 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 CAMK1Q14012 370 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 ABRAXAS2Q15018 415 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 EML3Q32P44 896 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 C10orf62Q5T681 223 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 IL23RQ5VWK5 629 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 TMEM215Q68D42 235 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 CAPRIN2Q6IMN6 1127 aaKnown RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 LAYNQ6UX15 382 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 MSANTD1Q6ZTZ1 278 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 ST13P4Q8IZP2 240 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 ESAMQ96AP7 390 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 MIEF2Q96C03 454 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 ZNF707Q96C28 371 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 FBXL8Q96CD0 374 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 PPP1R16AQ96I34 528 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 CDCA3Q99618 268 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 ALG2Q9H553 416 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 ACTR8Q9H981 624 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 GEMIN8Q9NWZ8 242 aaKnown RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 C1orf109Q9NX04 203 aa13.27□□□□□ -0.29
LIMS1-205ENST00000410093 ZNF490Q9ULM2 529 aaPredicted RBP13.27□□□□□ -0.29
LIMS1-205ENST00000410093 DENND4AQ7Z401 1863 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 EDDM13A0A1B0GTR0 161 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 C16orf96A6NNT2 1141 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 ANKRD28O15084 1053 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 ATG13O75143 517 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 KCNH1O95259 989 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 CEBPBP17676 345 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 ITGB7P26010 798 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 VARSP26640 1264 aaKnown RBP13.26□□□□□ -0.29
LIMS1-205ENST00000410093 MAP4P27816 1152 aaKnown RBP13.26□□□□□ -0.29
LIMS1-205ENST00000410093 ERFP50548 548 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 PNLIPRP1P54315 467 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 HSPA14Q0VDF9 509 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 RALGDSQ12967 914 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 PWP1Q13610 501 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 GRM2Q14416 872 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 PDGFRLQ15198 375 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 FBXO48Q5FWF7 155 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 LIPJQ5W064 366 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 HSD11B1LQ7Z5J1 315 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 ANKFN1Q8N957 763 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 FBXO15Q8NCQ5 510 aaPredicted RBP13.26□□□□□ -0.29
LIMS1-205ENST00000410093 BPIFB1Q8TDL5 484 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 SMG7Q92540 1137 aaKnown RBP13.26□□□□□ -0.29
LIMS1-205ENST00000410093 EME1Q96AY2 570 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 ZNF514Q96K75 400 aaPredicted RBP13.26□□□□□ -0.29
LIMS1-205ENST00000410093 CCDC138Q96M89 665 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 ZSWIM3Q96MP5 696 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 FOPNLQ96NB1 174 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 CDK15Q96Q40 435 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 PKP2Q99959 881 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 KCTD14Q9BQ13 255 aaPredicted RBP13.26□□□□□ -0.29
LIMS1-205ENST00000410093 PCDHAC1Q9H158 963 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 EBF3Q9H4W6 596 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 LRTM1Q9HBL6 345 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 DNAJC11Q9NVH1 559 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 THG1LQ9NWX6 298 aaKnown RBP13.26□□□□□ -0.29
LIMS1-205ENST00000410093 CMTM6Q9NX76 183 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 MAGEL2Q9UJ55 1249 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 PACSIN3Q9UKS6 424 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 MYO7AQ13402 2215 aa13.26□□□□□ -0.29
LIMS1-205ENST00000410093 DHRS12A0PJE2 317 aa13.25□□□□□ -0.29
LIMS1-205ENST00000410093 TTC34A8MYJ7 566 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms