RNA–Protein interactions for RNA: ENST00000410080.5

PRPF40A-202, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PRPF40A, Length 8,048 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-202ENST00000410080 OR14I1A6ND48 311 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ITGA2BP08514 1039 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 UGT1A1P22309 533 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 IGFBP5P24593 272 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 MPP2Q14168 576 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 OR2AG1Q9H205 316 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 KCNK4Q9NYG8 393 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SH3BGRL2Q9UJC5 107 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 CPQQ9Y646 472 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 PCM1Q15154 2024 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 PGRP06401 933 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 KHKP50053 298 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ECM1Q16610 540 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 BRMS1LQ5PSV4 323 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 PLPPR4Q7Z2D5 763 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ILDR1Q86SU0 546 aaPredicted RBP11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 GJD3Q8N144 294 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC35C1Q96A29 364 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF350Q9GZX5 532 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 SPATA7Q9P0W8 599 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 TRAF6Q9Y4K3 522 aa11.05□□□□□ -0.64
PRPF40A-202ENST00000410080 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 BTBD19C9JJ37 291 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 PDCD5O14737 125 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 AOC2O75106 756 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 FABP3P05413 133 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 WNT3AP56704 352 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 TUBB3Q13509 450 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.04□□□□□ -0.646e-7■■■□□ 15.9
PRPF40A-202ENST00000410080 PDSS1Q5T2R2 415 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CARD17Q5XLA6 110 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 VSIG10LQ86VR7 867 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 SERPINA9Q86WD7 417 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC35G5Q96KT7 338 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 IRF2BPLQ9H1B7 796 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 SPATA31C2B4DYI2 1134 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 FCER2P06734 321 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CCL5P13501 91 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 DNAJA1P31689 397 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 PSME3P61289 254 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 GHRHRQ02643 423 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 TMEM63BQ5T3F8 832 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 BICRALQ6AI39 1079 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 GK5Q6ZS86 529 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 SIDT2Q8NBJ9 832 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CHCHD6Q9BRQ6 235 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 MEAF6Q9HAF1 191 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CDC14AQ9UNH5 594 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 S100A2P29034 98 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 ACTR1BP42025 376 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CLEC6AQ6EIG7 209 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 PIWIL2Q8TC59 973 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 HSFY1Q96LI6 401 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CITED4Q96RK1 184 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 MTERF1Q99551 399 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC5A7Q9GZV3 580 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 PLAGL1Q9UM63 463 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 FARSAQ9Y285 508 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC38A8A6NNN8 435 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 BCKDKO14874 412 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 REM1O75628 298 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 TACR2P21452 398 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 KCNJ2P63252 427 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CDK10Q15131 360 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 TTC27Q6P3X3 843 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 TMEM161BQ8NDZ6 487 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 NLGN2Q8NFZ4 835 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 HAS1Q92839 578 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 UCK2Q9BZX2 261 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 FAM83DQ9H4H8 585 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 WDR26Q9H7D7 661 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 DNAAF2Q9NVR5 837 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 ARHGAP23Q9P227 1491 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 SLC30A4O14863 429 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 INSIG1O15503 277 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 DHFRP00374 187 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 MAGEA12P43365 314 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 ATP6V0D1P61421 351 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 RBM39Q14498 530 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 B3GNT6Q6ZMB0 384 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 SPATA19Q7Z5L4 167 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 C7orf57Q8NEG2 295 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 AZIN2Q96A70 460 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 PWWP2AQ96N64 755 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF184Q99676 751 aaPredicted RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 PCDH18Q9HCL0 1135 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 KCNMB3Q9NPA1 279 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 LYARQ9NX58 379 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 VWA7Q9Y334 891 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 ADAM18Q9Y3Q7 739 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 PCDHGC4Q9Y5F7 938 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 AHCYL1O43865 530 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 NAA20P61599 178 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 DSC2Q02487 901 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CSTF1Q05048 431 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 TUSC3Q13454 348 aa11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 GANABQ14697 944 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 ZNF782Q6ZMW2 699 aaPredicted RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 CNDP2Q96KP4 475 aaKnown RBP11.04□□□□□ -0.64
PRPF40A-202ENST00000410080 ADAD1Q96M93 576 aaKnown RBP11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms