RNA–Protein interactions for RNA: ENST00000409953.5

UBE2F-204, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 3 BASIC

Gene UBE2F, Length 924 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-204ENST00000409953 TAF5Q15542 800 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 HYAL4Q2M3T9 481 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 RILPL1Q5EBL4 403 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 FKBP15Q5T1M5 1219 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 KLHL35Q6PF15 583 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 CCBE1Q6UXH8 406 aaPredicted RBP6.7□□□□□ -1.34
UBE2F-204ENST00000409953 Q6ZVL8 140 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 WDR53Q7Z5U6 358 aaPredicted RBP6.7□□□□□ -1.34
UBE2F-204ENST00000409953 LIX1LQ8IVB5 337 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 RBM12BQ8IXT5 1001 aaKnown RBP6.7□□□□□ -1.34
UBE2F-204ENST00000409953 DEFB106AQ8N104 65 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 C3orf56Q8N813 242 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 GTPBP3Q969Y2 492 aaKnown RBP6.7□□□□□ -1.34
UBE2F-204ENST00000409953 CXorf40BQ96DE9 158 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 VPS50Q96JG6 964 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 PPM1MQ96MI6 270 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 GSDMAQ96QA5 445 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 SLC2A13Q96QE2 648 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 YIPF4Q9BSR8 244 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 AP1M1Q9BXS5 423 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 TRIM7Q9C029 511 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 ZYG11BQ9C0D3 744 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 MMRN2Q9H8L6 949 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 MRM3Q9HC36 420 aaKnown RBP6.7□□□□□ -1.34
UBE2F-204ENST00000409953 SRA1Q9HD15 236 aaKnown RBP6.7□□□□□ -1.34
UBE2F-204ENST00000409953 PLCB1Q9NQ66 1216 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 KLC4Q9NSK0 619 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 MKS1Q9NXB0 559 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 TAS2R14Q9NYV8 317 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 ZIM2Q9NZV7 527 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 C6orf203Q9P0P8 240 aaPredicted RBP6.7□□□□□ -1.34
UBE2F-204ENST00000409953 SERTAD3Q9UJW9 196 aa6.7□□□□□ -1.34
UBE2F-204ENST00000409953 CPAMD8Q8IZJ3 1885 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 A0A1B0GTH9 108 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 OR52A4PA6NMU1 304 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 VEGFDO43915 354 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 SHOX2O60902 331 aaPredicted RBP6.69□□□□□ -1.34
UBE2F-204ENST00000409953 HEXIM1O94992 359 aaKnown RBP6.69□□□□□ -1.34
UBE2F-204ENST00000409953 SOX30O94993 753 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 LETM1O95202 739 aaPredicted RBP6.69□□□□□ -1.34
UBE2F-204ENST00000409953 GOSR1O95249 250 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 ZNF24P17028 368 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 SERPINA4P29622 427 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 PREPP48147 710 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 PPP3CAQ08209 521 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 MUM1Q2TAK8 710 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 NKAIN1Q4KMZ8 207 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 ARTNQ5T4W7 220 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 TRIM72Q6ZMU5 477 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 HSD11B1LQ7Z5J1 315 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 PHLDB2Q86SQ0 1253 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 SHISA5Q8N114 240 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 LGI4Q8N135 537 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 LIX1Q8N485 282 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 AOPEPQ8N6M6 819 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.69□□□□□ -1.34
UBE2F-204ENST00000409953 OR5M3Q8NGP4 307 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 PPP1R14CQ8TAE6 165 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 PROKR1Q8TCW9 393 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 CASKIN2Q8WXE0 1202 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 ZBED6CLQ96FA7 236 aaPredicted RBP6.69□□□□□ -1.34
UBE2F-204ENST00000409953 FAXDC2Q96IV6 333 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 CITED4Q96RK1 184 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 TUBGCP5Q96RT8 1024 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 ZSWIM1Q9BR11 485 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 MESP1Q9BRJ9 268 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 HES7Q9BYE0 225 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 GSX2Q9BZM3 304 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 THAP9Q9H5L6 903 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 L2HGDHQ9H9P8 463 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 SYTL2Q9HCH5 934 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 BRD7Q9NPI1 651 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 KLHL1Q9NR64 748 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 VPS18Q9P253 973 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 CPSF2Q9P2I0 782 aaKnown RBP6.69□□□□□ -1.34
UBE2F-204ENST00000409953 DHCR7Q9UBM7 475 aaKnown RBP6.69□□□□□ -1.34
UBE2F-204ENST00000409953 LPAR3Q9UBY5 353 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 CD84Q9UIB8 345 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 DOCK4Q8N1I0 1966 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 CR1P17927 2039 aa6.69□□□□□ -1.34
UBE2F-204ENST00000409953 PHF3Q92576 2039 aaKnown RBP6.69□□□□□ -1.34
UBE2F-204ENST00000409953 VWFP04275 2813 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 A0A0G2JNJ9 132 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 OR5K3A6NET4 321 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 TUBAL3A6NHL2 446 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 AKAP10O43572 662 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 KDELR3O43731 214 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 E2F6O75461 281 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 CYP1A1P04798 512 aaPredicted RBP6.68□□□□□ -1.34
UBE2F-204ENST00000409953 RPLP1P05386 114 aaKnown RBP6.68□□□□□ -1.34
UBE2F-204ENST00000409953 SRD5A1P18405 259 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 FDXRP22570 491 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 EEF1DP29692 281 aaKnown RBP6.68□□□□□ -1.34
UBE2F-204ENST00000409953 ACADSBP45954 432 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 RPL34P49207 117 aaKnown RBP6.68□□□□□ -1.34
UBE2F-204ENST00000409953 CLCNKAP51800 687 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 KPNA2P52292 529 aaKnown RBP6.68□□□□□ -1.34
UBE2F-204ENST00000409953 POLR2LP62875 67 aaKnown RBP6.68□□□□□ -1.34
UBE2F-204ENST00000409953 APBA1Q02410 837 aa6.68□□□□□ -1.34
UBE2F-204ENST00000409953 DPTQ07507 201 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms