RNA–Protein interactions for RNA: ENST00000409952.3

LSM5-205, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 4 BASIC

Gene LSM5, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-205ENST00000409952 SQORQ9Y6N5 450 aa4.76□□□□□ -1.65
LSM5-205ENST00000409952 A0A1W2PPW3 197 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 SLC22A23A1A5C7 686 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 PIPSLA2A3N6 862 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 FAM149AA5PLN7 773 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 ZSCAN5CA6NGD5 496 aaPredicted RBP4.75□□□□□ -1.65
LSM5-205ENST00000409952 SGK1O00141 431 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 RHODO00212 210 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 INPPL1O15357 1258 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 TEX28O15482 410 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 FLRT2O43155 660 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 SCGB2A1O75556 95 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 EGFP01133 1207 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 CXCL10P02778 98 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 CSN3P07498 182 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 MYZAPP0CAP1 466 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 SKILP12757 684 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 ENO3P13929 434 aaPredicted RBP4.75□□□□□ -1.65
LSM5-205ENST00000409952 HRH2P25021 359 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 CDKN1AP38936 164 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 ME1P48163 572 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 C21orf58P58505 322 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 BLOC1S1P78537 153 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 GPM6BQ13491 265 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 STXBP2Q15833 593 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 SYT16Q17RD7 645 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 ENTPD8Q5MY95 495 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 TTC39AQ5SRH9 613 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 LCN10Q6JVE6 187 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 Q6YL49 198 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 Q6ZNX1 250 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 RBFAQ8N0V3 343 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 HORMAD2Q8N7B1 307 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 L3MBTL4Q8NA19 623 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 TMEM185AQ8NFB2 350 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 OR52M1Q8NGK5 317 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 BRSK1Q8TDC3 778 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 RNF139Q8WU17 664 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 EPSTI1Q96J88 318 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 ZNF333Q96JL9 665 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 SSX3Q99909 188 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 C16orf70Q9BSU1 422 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 TPPP3Q9BW30 176 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 TSPYL1Q9H0U9 437 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 TMEM245Q9H330 911 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 DPAGT1Q9H3H5 408 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 TOR3AQ9H497 397 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 TFB2MQ9H5Q4 396 aaKnown RBP4.75□□□□□ -1.65
LSM5-205ENST00000409952 MAGEF1Q9HAY2 307 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 MOV10Q9HCE1 1003 aaKnown RBP4.75□□□□□ -1.65
LSM5-205ENST00000409952 CPNE5Q9HCH3 593 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 PNRC2Q9NPJ4 139 aaKnown RBP4.75□□□□□ -1.65
LSM5-205ENST00000409952 SDAD1Q9NVU7 687 aaKnown RBP eCLIP4.75□□□□□ -1.65
LSM5-205ENST00000409952 RCOR1Q9UKL0 485 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 TTC7AQ9ULT0 858 aaPredicted RBP4.75□□□□□ -1.65
LSM5-205ENST00000409952 SMC3Q9UQE7 1217 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 SLC4A4Q9Y6R1 1079 aa4.75□□□□□ -1.65
LSM5-205ENST00000409952 A0A087WZY1 265 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 ILVBLA1L0T0 632 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 UBE2Q2LH0YL09 131 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 TMEM189-UBE2V1I3L0A0 370 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 J3QR06 171 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 E2F3O00716 465 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 SOCS6O14544 535 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 TO15178 435 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 IDH1O75874 414 aaKnown RBP4.74□□□□□ -1.65
LSM5-205ENST00000409952 EPN2O95208 641 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 PRAMEF12O95522 483 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 GCP02774 474 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 PGK2P07205 417 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 SAGP10523 405 aaPredicted RBP4.74□□□□□ -1.65
LSM5-205ENST00000409952 TOP1P11387 765 aaKnown RBP4.74□□□□□ -1.65
LSM5-205ENST00000409952 MYL6BP14649 208 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 MPZP25189 248 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 HSD17B3P37058 310 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 MAGEB1P43366 347 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 SLC9A3P48764 834 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 HNRNPFP52597 415 aaKnown RBP4.74□□□□□ -1.65
LSM5-205ENST00000409952 MTCP1P56278 107 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 CSNK2A1P68400 391 aaPredicted RBP4.74□□□□□ -1.65
LSM5-205ENST00000409952 OVGP1Q12889 678 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 PPP1R8Q12972 351 aaKnown RBP4.74□□□□□ -1.65
LSM5-205ENST00000409952 GAGE2BQ13066 116 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 SPP2Q13103 211 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 PDZK1IP1Q13113 114 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 UBE2V1Q13404 147 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 GIT2Q14161 759 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 GAGE2EQ4V326 116 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 LRRC23Q53EV4 343 aaPredicted RBP4.74□□□□□ -1.65
LSM5-205ENST00000409952 DCST1Q5T197 706 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 CCNYL2Q5T2Q4 361 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 GAGE2AQ6NT46 116 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 MFSD12Q6NUT3 480 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 ARSKQ6UWY0 536 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 ZNF534Q76KX8 674 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 MIGA1Q8NAN2 632 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 SLC38A9Q8NBW4 561 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 CSNK2A3Q8NEV1 391 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 CKAP2Q8WWK9 683 aa4.74□□□□□ -1.65
LSM5-205ENST00000409952 FIG4Q92562 907 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms