RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 RMND5BQ96G75 393 aaPredicted RBP16.54■□□□□ 0.24
GCFC2-202ENST00000409857 HACD3Q9P035 362 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 TCAF1Q9Y4C2 921 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 CROCCQ5TZA2 2017 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 SCN8AQ9UQD0 1980 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 NUMA1Q14980 2115 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 SAC3D1A6NKF1 404 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 C9JVG2 144 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 AKAP10O43572 662 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 RPP40O75818 363 aaKnown RBP16.54■□□□□ 0.24
GCFC2-202ENST00000409857 IPO13O94829 963 aaKnown RBP16.54■□□□□ 0.24
GCFC2-202ENST00000409857 ZNF30P17039 623 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 ATP6V1B2P21281 511 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 STT3AP46977 705 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 YBX1P67809 324 aaKnown RBP16.54■□□□□ 0.24
GCFC2-202ENST00000409857 TMED1Q13445 227 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 DCTN2Q13561 401 aaKnown RBP16.54■□□□□ 0.24
GCFC2-202ENST00000409857 ANKRD49Q8WVL7 239 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 TMEM181Q9P2C4 612 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 B4GALT6Q9UBX8 382 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 GIMAP2Q9UG22 337 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 CROTQ9UKG9 612 aa16.54■□□□□ 0.24
GCFC2-202ENST00000409857 TNRC6BQ9UPQ9 1833 aaKnown RBP16.53■□□□□ 0.24
GCFC2-202ENST00000409857 PLXNA2O75051 1894 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 A0A087X1B8 175 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 FAM149AA5PLN7 773 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 NPIPB15A6NHN6 443 aaPredicted RBP16.53■□□□□ 0.24
GCFC2-202ENST00000409857 PSMD11O00231 422 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 NRP2O60462 931 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 NDUFS2O75306 463 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 CCDC166P0CW27 439 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 CDK9P50750 372 aaKnown RBP16.53■□□□□ 0.24
GCFC2-202ENST00000409857 CCR5P51681 352 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 CDKN3Q16667 212 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 NHSL2Q5HYW2 709 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 HSPBAP1Q96EW2 488 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 C3orf30Q96M34 536 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 CHCHD3Q9NX63 227 aaKnown RBP16.53■□□□□ 0.24
GCFC2-202ENST00000409857 H0YJX3 145 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 ALPIP09923 528 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 CTPS1P17812 591 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 KCNC1P48547 511 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 RPS21P63220 83 aaKnown RBP16.53■□□□□ 0.24
GCFC2-202ENST00000409857 LRRC73Q5JTD7 316 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 LDB1Q86U70 411 aaPredicted RBP16.53■□□□□ 0.24
GCFC2-202ENST00000409857 RETREG3Q86VR2 466 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 FUNDC1Q8IVP5 155 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 CBARPQ8N350 705 aaPredicted RBP16.53■□□□□ 0.24
GCFC2-202ENST00000409857 FAM160A2Q8N612 972 aaPredicted RBP16.53■□□□□ 0.24
GCFC2-202ENST00000409857 FRMD1Q8N878 549 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 ASB12Q8WXK4 309 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 IRF2BPLQ9H1B7 796 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 PNPLA3Q9NST1 481 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 TREX1Q9NSU2 369 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 PTGDR2Q9Y5Y4 395 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 TRPM6Q9BX84 2022 aa16.53■□□□□ 0.24
GCFC2-202ENST00000409857 ZNF106Q9H2Y7 1883 aaKnown RBP16.52■□□□□ 0.24
GCFC2-202ENST00000409857 CCL22O00626 93 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 SRP72O76094 671 aaKnown RBP16.52■□□□□ 0.24
GCFC2-202ENST00000409857 NUDT1P36639 197 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 TRAP1Q12931 704 aaKnown RBP16.52■□□□□ 0.24
GCFC2-202ENST00000409857 MAPRE2Q15555 327 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 FAM83EQ2M2I3 478 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 NEPROQ6NW34 567 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 DHFR2Q86XF0 187 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 ERI1Q8IV48 349 aaKnown RBP16.52■□□□□ 0.24
GCFC2-202ENST00000409857 ALDH16A1Q8IZ83 802 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 CXorf40AQ8TE69 158 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 SLC45A3Q96JT2 553 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 RANBP9Q96S59 729 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 C19orf43Q9BQ61 176 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 TRIM8Q9BZR9 551 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 DUSP15Q9H1R2 295 aaPredicted RBP16.52■□□□□ 0.24
GCFC2-202ENST00000409857 AURKCQ9UQB9 309 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 ITM2BQ9Y287 266 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 TRAF6Q9Y4K3 522 aa16.52■□□□□ 0.24
GCFC2-202ENST00000409857 THADAQ6YHU6 1953 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3DA0A087WVF3 549 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3IA0A087WXS9 549 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3EA0A087X179 549 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3KA0A087X1G2 549 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3FA6NER0 549 aaPredicted RBP16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3LB9A6J9 549 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 LATO43561 262 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 HRO43593 1189 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TPST1O60507 370 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 RNGTTO60942 597 aaKnown RBP16.52■□□□□ 0.23
GCFC2-202ENST00000409857 ALDOCP09972 364 aaKnown RBP16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3HP0C7X1 549 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 CTBSQ01459 385 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 POU4F1Q01851 419 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 PLOD1Q02809 727 aaPredicted RBP16.52■□□□□ 0.23
GCFC2-202ENST00000409857 AGERQ15109 404 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 KIAA0895LQ68EN5 471 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3GQ6DHY5 549 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3CQ6IPX1 549 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 CRTC1Q6UUV9 634 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 HORMAD1Q86X24 394 aa16.52■□□□□ 0.23
GCFC2-202ENST00000409857 TBC1D3Q8IZP1 549 aaPredicted RBP16.52■□□□□ 0.23
GCFC2-202ENST00000409857 ZC3H10Q96K80 434 aaKnown RBP16.52■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms