RNA–Protein interactions for RNA: ENST00000409672.5

SCN9A-203, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS P2 TSL 5 BASIC

Gene SCN9A, Length 9,768 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-203ENST00000409672 OR12D2P58182 307 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 S100ZQ8WXG8 99 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 CAVIN3Q969G5 261 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 UHRF1Q96T88 793 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 RIOK2Q9BVS4 552 aaKnown RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 CCNB1IP1Q9NPC3 277 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 FBXL3Q9UKT7 428 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TRAF6Q9Y4K3 522 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 LOC110117498-PIK3R3F6TDL0 507 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 ZNF41P51814 821 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 VSX2P58304 361 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 AUHQ13825 339 aaKnown RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 GALNT18Q6P9A2 607 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 KYAT3Q6YP21 454 aaKnown RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 NIPA1Q7RTP0 329 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 RANBP3LQ86VV4 465 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TMPRSS6Q8IU80 811 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 DIP2BQ9P265 1576 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 CD48P09326 243 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 MSL3P1P0C860 447 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TYRP14679 529 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 GRK5P34947 590 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 MLLT10P55197 1068 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 BMT2Q1RMZ1 405 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 VPS26BQ4G0F5 336 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 IDNKQ5T6J7 187 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TMPPEQ6ZT21 453 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TOP6BLQ8N6T0 577 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 PHC3Q8NDX5 983 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TNFAIP8L1Q8WVP5 186 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 HTRA1Q92743 480 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 HSFY1Q96LI6 401 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 ADAD1Q96M93 576 aaKnown RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TMEM68Q96MH6 324 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 C12orf65Q9H3J6 166 aaKnown RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 NME6O75414 186 aaPredicted RBP8.27□□□□□ -1.09
SCN9A-203ENST00000409672 AAK1Q2M2I8 961 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 ANKRD26P1Q6NSI1 321 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 KIAA1161Q6NSJ0 714 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 VHLLQ6RSH7 139 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 RAB11FIP2Q7L804 512 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 GSTCDQ8NEC7 633 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 STYXQ8WUJ0 223 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 BAP1Q92560 729 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 PIK3R3Q92569 461 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 GLS2Q9UI32 602 aa8.27□□□□□ -1.09
SCN9A-203ENST00000409672 TRIM38O00635 465 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 COX4I1P13073 169 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 POLR2JP52435 117 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 AP1S2P56377 157 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 VBP1P61758 197 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 GCNT1Q02742 428 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 STK11Q15831 433 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ZSCAN4Q8NAM6 433 aaPredicted RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 SLC35G5Q96KT7 338 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 CPXM1Q96SM3 734 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 C8orf4Q9NR00 106 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 SDHAF3Q9NRP4 125 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 SMIM30A4D0T7 59 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ARVCFO00192 962 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TNFRSF11BO00300 401 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PSMD10O75832 226 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 LCA5LO95447 670 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 CCR8P51685 355 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PRKAA2P54646 552 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PON2Q15165 354 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 IL23RQ5VWK5 629 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PRDM8Q9NQV8 689 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 IFT80Q9P2H3 777 aaPredicted RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 GABRQQ9UN88 632 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 FKBP7Q9Y680 259 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 IQGAP3Q86VI3 1631 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 MYH14Q7Z406 1995 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 GPR25O00155 361 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PRMT5O14744 637 aaPredicted RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ACSL1P33121 698 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 APLP1P51693 650 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 GHRHRQ02643 423 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 GXYLT1Q4G148 440 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TMEM119Q4V9L6 283 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TXNDC11Q6PKC3 985 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TMPRSS11AQ6ZMR5 421 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 SHISA6Q6ZSJ9 500 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 GALNT10Q86SR1 603 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 IGFN1Q86VF2 1251 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 ZCCHC9Q8N567 271 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 OR6N1Q8NGY5 312 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TWIST2Q8WVJ9 160 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 SAT2Q96F10 170 aaPredicted RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 LHX5Q9H2C1 402 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 MYEF2Q9P2K5 600 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TAC3Q9UHF0 121 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PPM1HQ9ULR3 514 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 TMEM5Q9Y2B1 443 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 C2orf92A0A1B0GVN3 265 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 H7C0S8 307 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 L7N2F9 121 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 AP5Z1O43299 807 aa8.26□□□□□ -1.09
SCN9A-203ENST00000409672 GATBO75879 557 aaKnown RBP8.26□□□□□ -1.09
SCN9A-203ENST00000409672 PAK4O96013 591 aaPredicted RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms