RNA–Protein interactions for RNA: ENST00000409604.1

SNX13-202, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 4,146 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-202ENST00000409604 OTOL1A6NHN0 477 aaPredicted RBP11.15□□□□□ -0.63
SNX13-202ENST00000409604 MAN2B1O00754 1011 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 TBX10O75333 385 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 GSRP00390 522 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 GSTM1P09488 218 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 C5AR1P21730 350 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 CALB2P22676 271 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 P2RY2P41231 377 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 TGM3Q08188 693 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 VAC14Q08AM6 782 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 FRG1Q14331 258 aaKnown RBP11.15□□□□□ -0.63
SNX13-202ENST00000409604 SEMA3AQ14563 771 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 PPP1R3AQ16821 1122 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 MLIPQ5VWP3 458 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 KBTBD6Q86V97 674 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 PARP9Q8IXQ6 854 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 SLC44A3Q8N4M1 653 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 OR4F6Q8NGB9 312 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 CYGBQ8WWM9 190 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 SLC45A3Q96JT2 553 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 TRIM15Q9C019 465 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 PHACTR1Q9C0D0 580 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 RMND5AQ9H871 391 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 SIT1Q9Y3P8 196 aa11.15□□□□□ -0.63
SNX13-202ENST00000409604 ZNF487B1APH4 448 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 NDUFB5O43674 189 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 ENTPD5O75356 428 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 ZDHHC11BP0C7U3 371 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 ZNF23P17027 643 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 ACRV1P26436 265 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 ATP6V1E1P36543 226 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 PLOD1Q02809 727 aaPredicted RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 KRT72Q14CN4 511 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 KIAA1211LQ6NV74 962 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 GPR180Q86V85 440 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 GATAD2AQ86YP4 633 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 OR5AR1Q8NGP9 310 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 BTN2A2Q8WVV5 523 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 LRRC3BQ96PB8 259 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 KCTD14Q9BQ13 255 aaPredicted RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 MRPS30Q9NP92 439 aaKnown RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 PLEKHM1Q9Y4G2 1056 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 DNAJC13O75165 2243 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 K7EPI3 171 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 SMNDC1O75940 238 aaKnown RBP eCLIP11.14□□□□□ -0.63
SNX13-202ENST00000409604 SRPRAP08240 638 aaKnown RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 ATXN1LP0C7T5 689 aaKnown RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 DRD1P21728 446 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 VARSP26640 1264 aaKnown RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 PTGER1P34995 402 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 BLKP51451 505 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 SLC7A2P52569 658 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 GTF2A1P52655 376 aaPredicted RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 SLC16A1P53985 500 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 MANFP55145 182 aaKnown RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 MPP7Q5T2T1 576 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 C9orf64Q5T6V5 341 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 ZNF534Q76KX8 674 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 PMEPA1Q969W9 287 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 RSPRY1Q96DX4 576 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 PHF7Q9BWX1 381 aaPredicted RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 CTPS2Q9NRF8 586 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 RGPD3A6NKT7 1758 aaPredicted RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 RGPD4Q7Z3J3 1758 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 E7ESA3 106 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 LATS1O95835 1130 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 CDH1P12830 882 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 COX4I1P13073 169 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 BMP1P13497 986 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 NQO1P15559 274 aaKnown RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 PIK3R1P27986 724 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 PGDP52209 483 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 IRX1P78414 480 aaPredicted RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 NFKB2Q00653 900 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 OR4D1Q15615 310 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 CENPLQ8N0S6 344 aaPredicted RBP11.14□□□□□ -0.63
SNX13-202ENST00000409604 AGGF1Q8N302 714 aaeCLIP11.14□□□□□ -0.63
SNX13-202ENST00000409604 OR10Q1Q8NGQ4 319 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 XAGE5Q8WWM1 108 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 TUBGCP5Q96RT8 1024 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 NCDNQ9UBB6 729 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 WASF2Q9Y6W5 498 aa11.14□□□□□ -0.63
SNX13-202ENST00000409604 SCN10AQ9Y5Y9 1956 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 BIRC5O15392 142 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 CACNG3O60359 315 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 SLC16A8O95907 504 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 SNRPB2P08579 225 aaKnown RBP11.13□□□□□ -0.63
SNX13-202ENST00000409604 LHCGRP22888 699 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 RNF144AP50876 292 aaPredicted RBP11.13□□□□□ -0.63
SNX13-202ENST00000409604 HKDC1Q2TB90 917 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 CHSY3Q70JA7 882 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 ZNF438Q7Z4V0 828 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 ADIPOR2Q86V24 386 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 RNF175Q8N4F7 328 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 PIH1D2Q8WWB5 315 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 C8orf33Q9H7E9 229 aaPredicted RBP11.13□□□□□ -0.63
SNX13-202ENST00000409604 MUTYHQ9UIF7 546 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 RFXANKO14593 260 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 NDUFS4O43181 175 aa11.13□□□□□ -0.63
SNX13-202ENST00000409604 ERI3O43414 337 aaKnown RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms