RNA–Protein interactions for RNA: ENST00000409531.5

TSPAN4-208, Transcript of tetraspanin 4, humanhuman

TSL 5 BASIC

Gene TSPAN4, Length 1,339 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-208ENST00000409531 USP24Q9UPU5 2620 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 PABPN1LA6NDY0 278 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 SLC16A5O15375 505 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 ZBTB14O43829 449 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 GLRA3O75311 464 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 CD1DP15813 335 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 NDUFS1P28331 727 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 IRF9Q00978 393 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 E2F1Q01094 437 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 ABRQ12979 859 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 ACAP2Q15057 778 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 HSP90B2PQ58FF3 399 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 C6orf132Q5T0Z8 1188 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 TTC23LQ6PF05 361 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 IYDQ6PHW0 289 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 CYHR1Q6ZMK1 362 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 SH2D5Q6ZV89 423 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 ADAMTSL2Q86TH1 951 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 C4orf33Q8N1A6 199 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 KCTD4Q8WVF5 259 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 ASB11Q8WXH4 323 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 ZBTB9Q96C00 473 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 NXNL1Q96CM4 212 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 CXorf40BQ96DE9 158 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 ATP6V1G3Q96LB4 118 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 IQCGQ9H095 443 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 STN1Q9H668 368 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 SSU72Q9NP77 194 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 TSR3Q9UJK0 312 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 KLK13Q9UKR3 277 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 NOVA2Q9UNW9 492 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 RUVBL2Q9Y230 463 aaKnown RBP16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 ASF1AQ9Y294 204 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 WDR37Q9Y2I8 494 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 COLEC10Q9Y6Z7 277 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 CHD6Q8TD26 2715 aa16.1■□□□□ 0.17
TSPAN4-208ENST00000409531 SPEGQ15772 3267 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 LY6G6EA0A0G2JKS1 128 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 FOXO6A8MYZ6 492 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 HMGB1P1B2RPK0 211 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 B4DGG1 531 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 BTN3A1O00481 513 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 KDM1AO60341 852 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 PSIP1O75475 530 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 ENO2P09104 434 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 RBP1P09455 135 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 MTHFD1P11586 935 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 MYF5P13349 255 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 BRAFP15056 766 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 XRCC1P18887 633 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 CYP2A7P20853 494 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 MAP4P27816 1152 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 RPIAP49247 311 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 KRT33BQ14525 404 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 CLCA4Q14CN2 919 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 RPE65Q16518 533 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 UBE2R2Q712K3 238 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 SLC9B2Q86UD5 537 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 EXOC3L1Q86VI1 746 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 TMPRSS12Q86WS5 348 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 TRIM48Q8IWZ4 208 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 TBC1D21Q8IYX1 336 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 SFRP1Q8N474 314 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 SPDYE1Q8NFV5 336 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 CFAP61Q8NHU2 1237 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 RHEBL1Q8TAI7 183 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 STAG3L4Q8TBR4 150 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 MAPK15Q8TD08 544 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 KIAA1191Q96A73 305 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 TLCD1Q96CP7 247 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 APOPT1Q96IL0 206 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 INSM2Q96T92 566 aaPredicted RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 TRIM54Q9BYV2 358 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 TRIT1Q9H3H1 467 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 TFB2MQ9H5Q4 396 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 MVB12BQ9H7P6 319 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 IGSF5Q9NSI5 407 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 POT1Q9NUX5 634 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 IMP3Q9NV31 184 aaKnown RBP16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 POLG2Q9UHN1 485 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 GRID1Q9ULK0 1009 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 U3KQA8 63 aa16.09■□□□□ 0.17
TSPAN4-208ENST00000409531 EME2A4GXA9 379 aaPredicted RBP16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 OR52A4PA6NMU1 304 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 GFYI3L273 518 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 GP1BAP07359 652 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 TFEBP19484 476 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 CRHR1P34998 444 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 DLG1Q12959 904 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 NR0B2Q15466 257 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 OGFOD3Q6PK18 319 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 FRA10AC1Q70Z53 315 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 DCUN1D3Q8IWE4 304 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 RBM12BQ8IXT5 1001 aaKnown RBP16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 SLC35F3Q8IY50 421 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 NAGSQ8N159 534 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 SPATA6LQ8N4H0 392 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 ARL10Q8N8L6 244 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 BANPQ8N9N5 519 aa16.08■□□□□ 0.16
TSPAN4-208ENST00000409531 FBXO15Q8NCQ5 510 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms