RNA–Protein interactions for RNA: ENST00000409470.5

USP39-203, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,034 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-203ENST00000409470 KRT6BP04259 564 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 GSTM1P09488 218 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 IL12AP29459 219 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 GPR1P46091 355 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 SLC6A12P48065 614 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 PREPP48147 710 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 KRT6CP48668 564 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 HMGCS1Q01581 520 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 GSTM4Q03013 218 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 PRKG2Q13237 762 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 ZXDCQ2QGD7 858 aaPredicted RBP20.21■□□□□ 0.83
USP39-203ENST00000409470 TIGD2Q4W5G0 525 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 LPCAT4Q643R3 524 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 SYCE2Q6PIF2 218 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 RNF165Q6ZSG1 346 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 ERN2Q76MJ5 926 aaKnown RBP20.21■□□□□ 0.83
USP39-203ENST00000409470 PQLC1Q8N2U9 271 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 MTFMTQ96DP5 389 aaKnown RBP20.21■□□□□ 0.83
USP39-203ENST00000409470 MRPL38Q96DV4 380 aaKnown RBP20.21■□□□□ 0.83
USP39-203ENST00000409470 ATG10Q9H0Y0 220 aa20.21■□□□□ 0.83
USP39-203ENST00000409470 C6orf203Q9P0P8 240 aaPredicted RBP20.21■□□□□ 0.83
USP39-203ENST00000409470 EIF3LQ9Y262 564 aaKnown RBP20.21■□□□□ 0.83
USP39-203ENST00000409470 KAT7O95251 611 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 ITPKAP23677 461 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 FOXM1Q08050 763 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 MAD2L1Q13257 205 aaPredicted RBP20.2■□□□□ 0.83
USP39-203ENST00000409470 RAB30Q15771 203 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 ANKRD54Q6NXT1 300 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 TRIM46Q7Z4K8 759 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 TRIM74Q86UV6 250 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 GLMNQ92990 594 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 ECSITQ9BQ95 431 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 KXD1Q9BQD3 176 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 ZCCHC2Q9C0B9 1178 aaKnown RBP20.2■□□□□ 0.83
USP39-203ENST00000409470 DNAJC11Q9NVH1 559 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 CNOT6Q9ULM6 557 aaKnown RBP20.2■□□□□ 0.83
USP39-203ENST00000409470 SLC22A14Q9Y267 594 aa20.2■□□□□ 0.83
USP39-203ENST00000409470 KIAA1549LQ6ZVL6 1849 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 ASPDHA6ND91 283 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 K7ESM1 405 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 FXYD1O00168 92 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 NME4O00746 187 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 GNPDA1P46926 289 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 ZNF765Q7L2R6 523 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 ZFAND4Q86XD8 727 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 LILRA3Q8N6C8 439 aaPredicted RBP20.2■□□□□ 0.82
USP39-203ENST00000409470 USP7Q93009 1102 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 KLHL4Q9C0H6 718 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 THAP10Q9P2Z0 257 aaPredicted RBP20.2■□□□□ 0.82
USP39-203ENST00000409470 ABCD2Q9UBJ2 740 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 LRCH1Q9Y2L9 728 aa20.2■□□□□ 0.82
USP39-203ENST00000409470 ANTXRLA6NF34 631 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 PSIP1O75475 530 aaKnown RBP20.19■□□□□ 0.82
USP39-203ENST00000409470 SOD1P00441 154 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 PSMC3P17980 439 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 PEX2P28328 305 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 HYAL1Q12794 435 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 PAGE3Q5JUK9 113 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 NEK5Q6P3R8 708 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 SLC15A3Q8IY34 581 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 RGL4Q8IZJ4 473 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 CXorf40AQ8TE69 158 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 N4BP2L2Q92802 583 aaPredicted RBP20.19■□□□□ 0.82
USP39-203ENST00000409470 FBXL8Q96CD0 374 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 LRGUKQ96M69 825 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 MYADMQ96S97 322 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 ELOVL6Q9H5J4 265 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 LRTM1Q9HBL6 345 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 PRSS16Q9NQE7 514 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 SNX6Q9UNH7 406 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 SLC5A10A0PJK1 596 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 ARHGEF33A8MVX0 844 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 SEC22BO75396 215 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 CATP04040 527 aaKnown RBP20.19■□□□□ 0.82
USP39-203ENST00000409470 SLC6A2P23975 617 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 SMU1Q2TAY7 513 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 TMEM52BQ4KMG9 183 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 EGFLAMQ63HQ2 1017 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 TMEM184AQ6ZMB5 413 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 SELENOMQ8WWX9 145 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 FOPNLQ96NB1 174 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 OR2AG1Q9H205 316 aa20.19■□□□□ 0.82
USP39-203ENST00000409470 LRRK1Q38SD2 2015 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 COL4A3Q01955 1670 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 DYTNA2CJ06 578 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 DNAJA2O60884 412 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 PDYNP01213 254 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 GDI1P31150 447 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 TLR1Q15399 786 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 GGTA1PQ4G0N0 100 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 SLC44A4Q53GD3 710 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 EEF1AKMT2Q5JPI9 291 aaKnown RBP20.18■□□□□ 0.82
USP39-203ENST00000409470 ATAT1Q5SQI0 421 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 C6orf10Q5SRN2 563 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 CYP2R1Q6VVX0 501 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 NLRP8Q86W28 1048 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 DHFR2Q86XF0 187 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 TRAPPC5Q8IUR0 188 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 RASGRP3Q8IV61 690 aa20.18■□□□□ 0.82
USP39-203ENST00000409470 DNAJB14Q8TBM8 379 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms