RNA–Protein interactions for RNA: ENST00000405675.7

CSNK1E-205, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5 BASIC

Gene CSNK1E, Length 2,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-205ENST00000405675 IRX1P78414 480 aaPredicted RBP28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 CNTN1Q12860 1018 aa28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 SMAD4Q13485 552 aaKnown RBP28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 PTCHD3Q3KNS1 767 aa28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 SYTL3Q4VX76 610 aa28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 SGO1Q5FBB7 561 aa28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 NEK5Q6P3R8 708 aa28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 LRRC70Q7Z2Q7 622 aa28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 TCAIMQ8N3R3 496 aa28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 KCNK12Q9HB15 430 aa28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 IL1RL2Q9HB29 575 aa28.28■■■□□ 2.12
CSNK1E-205ENST00000405675 SLC5A10A0PJK1 596 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 ASPDHA6ND91 283 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 K7EQS6 105 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 MANBAO00462 879 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 ACOT8O14734 319 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 ANGPT2O15123 496 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 IL12AP29459 219 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 GRIK2Q13002 908 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 EEF1AKMT2Q5JPI9 291 aaKnown RBP28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 ZNF765Q7L2R6 523 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 MCOLN3Q8TDD5 553 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 VPS33AQ96AX1 596 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 SPAG4Q9NPE6 437 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 HEBP1Q9NRV9 189 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 ZNHIT2Q9UHR6 403 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 STON1Q9Y6Q2 735 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 ARHGEF33A8MVX0 844 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 NVLO15381 856 aaKnown RBP28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 SLC22A3O75751 556 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 WDR47O94967 919 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 RPSAP08865 295 aaKnown RBP28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 SEC13P55735 322 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 EMX2Q04743 252 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 AP5B1Q2VPB7 878 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 RAET1GQ6H3X3 334 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 Q7L0L9 218 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 CACUL1Q86Y37 369 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 CHPFQ8IZ52 775 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 CHCHD4Q8N4Q1 142 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 PCYOX1LQ8NBM8 494 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 ROPN1LQ96C74 230 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 SPDL1Q96EA4 605 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 TMEM181Q9P2C4 612 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 GULP1Q9UBP9 304 aa28.27■■■□□ 2.12
CSNK1E-205ENST00000405675 MAP3K7O43318 606 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 GSTM1P09488 218 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 CTHP32929 405 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 GPR1P46091 355 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 HNMTP50135 292 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 GSTM4Q03013 218 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 RCAN2Q14206 197 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 TAF11Q15544 211 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 RFTN2Q52LD8 501 aaPredicted RBP28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 TLDC1Q6P9B6 456 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 SLC44A3Q8N4M1 653 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 ZNF513Q8N8E2 541 aaPredicted RBP28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 TMEM159Q96B96 161 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 GPATCH1Q9BRR8 931 aaKnown RBP28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 ATG10Q9H0Y0 220 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 OR2AG1Q9H205 316 aa28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 GMPR2Q9P2T1 348 aaKnown RBP28.26■■■□□ 2.11
CSNK1E-205ENST00000405675 PRORSD1PA6NEY8 169 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 C1QTNF3-AMACRE9PGA6 284 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 BCAS2O75934 225 aaPredicted RBP28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 CLDN9O95484 217 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 ITPKAP23677 461 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 YBX1P67809 324 aaKnown RBP28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 ZNF658BQ4V348 819 aaPredicted RBP28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 TTC23LQ6PF05 361 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 DSG4Q86SJ6 1040 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 ADGRG6Q86SQ4 1221 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 BHLHE22Q8NFJ8 381 aaPredicted RBP28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 GLMNQ92990 594 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 HDAC8Q9BY41 377 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 ACTR8Q9H981 624 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 CD300AQ9UGN4 299 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 ZNF490Q9ULM2 529 aaPredicted RBP28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 POLR3HQ9Y535 204 aaPredicted RBP28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 FXYD1O00168 92 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 LILRB5O75023 590 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 PSIP1O75475 530 aaKnown RBP28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 G6PDP11413 515 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 PDHA2P29803 388 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 TIE1P35590 1138 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 SLC7A2P52569 658 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 AP1S2P56377 157 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 HMGCS1Q01581 520 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 CCSMST1Q4G0I0 132 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 PIP5KL1Q5T9C9 394 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 IL23RQ5VWK5 629 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 PROKR1Q8TCW9 393 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 ZIM2Q9NZV7 527 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 CIDEBQ9UHD4 219 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 SLC22A14Q9Y267 594 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 FADS3Q9Y5Q0 445 aa28.25■■■□□ 2.11
CSNK1E-205ENST00000405675 PABPN1LA6NDY0 278 aaKnown RBP28.24■■■□□ 2.11
CSNK1E-205ENST00000405675 PRAMEF4O60810 478 aa28.24■■■□□ 2.11
CSNK1E-205ENST00000405675 ULK1O75385 1050 aa28.24■■■□□ 2.11
CSNK1E-205ENST00000405675 TNFRSF4P43489 277 aa28.24■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms