RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 CCR5P51681 352 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 CCNG1P51959 295 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 FOXA1P55317 472 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SIGLEC14Q08ET2 396 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 DMWDQ09019 674 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SP140Q13342 867 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 KRT33BQ14525 404 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 PTCHD3Q3KNS1 767 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SLC9B1Q4ZJI4 515 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 METRNLQ641Q3 311 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 DUS1LQ6P1R4 473 aaKnown RBP3.62□□□□□ -1.83
RTN4-208ENST00000404909 NEK10Q6ZWH5 1172 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 MAVSQ7Z434 540 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 GOLGA7Q7Z5G4 137 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 DDIASQ8IXT1 998 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SYTL1Q8IYJ3 562 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 RGL4Q8IZJ4 473 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 AFAP1L2Q8N4X5 818 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 CAMKK1Q8N5S9 505 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 CDYL2Q8N8U2 506 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SNX31Q8N9S9 440 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 OR5AR1Q8NGP9 310 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 CCL4L1Q8NHW4 92 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 MAPK15Q8TD08 544 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 ERP27Q96DN0 273 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SPACA7Q96KW9 195 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 C12orf66Q96MD2 445 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 HSPA12BQ96MM6 686 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 SLC6A18Q96N87 628 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 TMEM79Q9BSE2 394 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 WWP1Q9H0M0 922 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 DPEP2Q9H4A9 486 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 RDH14Q9HBH5 336 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 PRDM8Q9NQV8 689 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 TMCO1Q9UM00 188 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 APOBEC2Q9Y235 224 aaKnown RBP3.62□□□□□ -1.83
RTN4-208ENST00000404909 SLC22A14Q9Y267 594 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 WDR37Q9Y2I8 494 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 TIMM22Q9Y584 194 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 CACNA1HO95180 2353 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 GPR179Q6PRD1 2367 aa3.62□□□□□ -1.83
RTN4-208ENST00000404909 ATP6AP2A0A1C7CYW4 349 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ANKRD65E5RJM6 399 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 MATN2O00339 956 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CLGNO14967 610 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 AZIN1O14977 448 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SLC16A5O15375 505 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ATP6AP2O75787 350 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 KIAA0754O94854 1291 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 C1orf105O95561 183 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 MLYCDO95822 493 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 C7P10643 843 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 EPB42P16452 691 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 NCF2P19878 526 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 IDSP22304 550 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ACTR1BP42025 376 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 RABIFP47224 123 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 IDH3AP50213 366 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 AP1S2P56377 157 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 KIAA1024LP59773 190 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PFN3P60673 137 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SRP54P61011 504 aaKnown RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 ACTR1AP61163 376 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 NAE1Q13564 534 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PCBP2Q15366 365 aaKnown RBP eCLIP3.61□□□□□ -1.839e-21■■□□□ 12.6
RTN4-208ENST00000404909 ZXDCQ2QGD7 858 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 ZNF658BQ4V348 819 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 TTC23LQ6PF05 361 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SCIMPQ6UWF3 145 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 XKR5Q6UX68 686 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CCDC121Q6ZUS5 278 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 GPRIN3Q6ZVF9 776 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 TRPM8Q7Z2W7 1104 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PDZD3Q86UT5 571 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 SLC22A18ASQ8N1D0 253 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 FITM2Q8N6M3 262 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ZNF483Q8TF39 744 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 IL17FQ96PD4 163 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 OR2M4Q96R27 311 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 UHRF1Q96T88 793 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 HBEGFQ99075 208 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PKP4Q99569 1192 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 NRTNQ99748 197 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PLCD4Q9BRC7 762 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ZDHHC5Q9C0B5 715 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 TMEM168Q9H0V1 697 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 OR52A5Q9H2C5 316 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 RMI1Q9H9A7 625 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 ARMCX1Q9P291 453 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PNMA8BQ9ULN7 279 aaPredicted RBP3.61□□□□□ -1.83
RTN4-208ENST00000404909 BTRCQ9Y297 605 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 PTGDR2Q9Y5Y4 395 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 HS3ST3A1Q9Y663 406 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CUL9Q8IWT3 2517 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 CCT8L1PA6NM43 557 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 K7EPI3 171 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 K7ESF4 209 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 FFAR3O14843 346 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 GPR42O15529 346 aa3.61□□□□□ -1.83
RTN4-208ENST00000404909 DCTN3O75935 186 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms