RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 POLG2Q9UHN1 485 aa17.61■□□□□ 0.41
PTPRN2-204ENST00000404321 TMEM184BQ9Y519 407 aaPredicted RBP17.61■□□□□ 0.41
PTPRN2-204ENST00000404321 LOC101059948A0A1B0GTJ6 334 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 PIPSLA2A3N6 862 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 C2orf74A8MZ97 194 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 MATN2O00339 956 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 PFDN6O15212 129 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 TTI1O43156 1089 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 SLCO2B1O94956 709 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 CHRM5P08912 532 aaPredicted RBP17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 ST6GAL1P15907 406 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 CHRM3P20309 590 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 OGNP20774 298 aaKnown RBP17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 MAP4P27816 1152 aaKnown RBP17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 MRPS25P82663 173 aaKnown RBP17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 ACY1Q03154 408 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 DHX9Q08211 1270 aaKnown RBP17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 LONRF1Q17RB8 773 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 MSS51Q4VC12 460 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 TAF1BQ53T94 588 aaPredicted RBP17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 PCSK4Q6UW60 755 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 C6orf15Q6UXA7 325 aaPredicted RBP17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 IL17FQ96PD4 163 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 TCF12Q99081 682 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 TRIM31Q9BZY9 425 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 GPN2Q9H9Y4 310 aaPredicted RBP17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 FBXO6Q9NRD1 293 aaPredicted RBP17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 C1GALT1Q9NS00 363 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 GALPQ9UBC7 116 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 NFS1Q9Y697 457 aa17.6■□□□□ 0.41
PTPRN2-204ENST00000404321 KRT87PA6NCN2 255 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 ATXN7O15265 892 aaPredicted RBP17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 USP1O94782 785 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 S1PR4O95977 384 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 ESR1P03372 595 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 PRB1P04280 392 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 NTRK1P04629 796 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 UGT2B7P16662 529 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 IVDP26440 423 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 BDKRB1P46663 353 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 RHDQ02161 417 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 BBS9Q3SYG4 887 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 HP1BP3Q5SSJ5 553 aaPredicted RBP17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 TMTC4Q5T4D3 741 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 ARMC3Q5W041 872 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 TAX1BP1Q86VP1 789 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 ZSCAN1Q8NBB4 408 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 KIAA1143Q96AT1 154 aaPredicted RBP17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 KRT12Q99456 494 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 IL17BQ9UHF5 180 aa17.59■□□□□ 0.41
PTPRN2-204ENST00000404321 PKMP14618 531 aaKnown RBP17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 PGAM1P18669 254 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 SLC1A2P43004 574 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 TUBB4BP68371 445 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 TUBB2AQ13885 445 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 PRAMEF17Q5VTA0 474 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 CYB5D1Q6P9G0 228 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 CNSTQ6PJW8 725 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 SPESP1Q6UW49 350 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 UNC5DQ6UXZ4 953 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 PCGF5Q86SE9 256 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 HOOK3Q86VS8 718 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 FAM20CQ8IXL6 584 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 ESX1Q8N693 406 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 SERBP1Q8NC51 408 aaKnown RBP eCLIP17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 SLC39A7Q92504 469 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 TTC9Q92623 222 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 ZNF501Q96CX3 271 aaPredicted RBP17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 TRAPPC9Q96Q05 1148 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 OR2A14Q96R47 310 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 TUBB2BQ9BVA1 445 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 PITPNM3Q9BZ71 974 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 IARS2Q9NSE4 1012 aaKnown RBP17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 BTRCQ9Y297 605 aa17.58■□□□□ 0.4
PTPRN2-204ENST00000404321 EIF4E1BA6NMX2 242 aaKnown RBP17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 ISM1B1AKI9 464 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 E5RI56 91 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 ERVH48-1M5A8F1 160 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 KPNA5O15131 536 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 PKLRP30613 574 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 STAT5AP42229 794 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 MPP1Q00013 466 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 ABHD18Q0P651 414 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 COL9A2Q14055 689 aaPredicted RBP17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 GRB7Q14451 532 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 CRYMQ14894 314 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 CCSMST1Q4G0I0 132 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 HSP90AA5PQ58FG0 334 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 ACSBG2Q5FVE4 666 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 SYT10Q6XYQ8 523 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 SYDE1Q6ZW31 735 aaPredicted RBP17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 IGDCC3Q8IVU1 814 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 DCUN1D3Q8IWE4 304 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 CARFQ8N187 725 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 EXTL1Q92935 676 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 RUNDC3BQ96NL0 473 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 INTS10Q9NVR2 710 aaKnown RBP17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 OR6C2Q9NZP2 312 aa17.57■□□□□ 0.4
PTPRN2-204ENST00000404321 CROTQ9UKG9 612 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms