RNA–Protein interactions for RNA: ENST00000403542.6

RBM39-206, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,883 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-206ENST00000403542 GOLM1Q8NBJ4 401 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 MCOLN3Q8TDD5 553 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 LINC01599Q8WXQ3 324 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 KCNJ9Q92806 393 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 FAM120BQ96EK7 910 aaKnown RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 NEURL2Q9BR09 285 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 HERC2P3Q9BVR0 1158 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 MIR1-1HGQ9H1L0 117 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 HEBP1Q9NRV9 189 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 EIF3LQ9Y262 564 aaKnown RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 PATJQ8NI35 1801 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 PRMT5O14744 637 aaPredicted RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 CREG1O75629 220 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 VNN2O95498 520 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 OTCP00480 354 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 ATF6P18850 670 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 AQP1P29972 269 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 CCND3P30281 292 aaPredicted RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 CD97P48960 835 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 NCS1P62166 190 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 ARF5P84085 180 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 PPP2R2BQ00005 443 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 EMX1Q04741 257 aaPredicted RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 MBTPS1Q14703 1052 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 SKIV2LQ15477 1246 aaKnown RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 CEP68Q76N32 757 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 VTCN1Q7Z7D3 282 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 DPP10Q8N608 796 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 TSPEARQ8WU66 669 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 DPH2Q9BQC3 489 aaPredicted RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 EBPLQ9BY08 206 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 ADGRE3Q9BY15 652 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 MUC13Q9H3R2 512 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 FNIP2Q9P278 1114 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 OPTCQ9UBM4 332 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 ABCG2Q9UNQ0 655 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 GLTPD2A6NH11 291 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 BCKDKO14874 412 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 KLK8O60259 260 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 NADKO95544 446 aaPredicted RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 ANGPTL1O95841 491 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 C7P10643 843 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 PORP16435 677 aaPredicted RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 ATP5C1P36542 298 aaKnown RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 RHOAP61586 193 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 LAIR1Q6GTX8 287 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 PRR23BQ6ZRT6 265 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 RNF168Q8IYW5 571 aaPredicted RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 EID3Q8N140 333 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 RHBDF1Q96CC6 855 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 UROC1Q96N76 676 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 SYT17Q9BSW7 474 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 PARVBQ9HBI1 364 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 PAIP2BQ9ULR5 123 aaKnown RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 ERGIC3Q9Y282 383 aa11.73□□□□□ -0.53
RBM39-206ENST00000403542 ARIH1Q9Y4X5 557 aaPredicted RBP11.73□□□□□ -0.53
RBM39-206ENST00000403542 C2orf78A6NCI8 922 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 C16orf96A6NNT2 1141 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 A8MU76 341 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 H3BNC9 293 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 M0R3G1 203 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 PER2O15055 1255 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 NDUFS2O75306 463 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 CLDN7O95471 211 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 GSTM2P28161 218 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 SLC11A2P49281 568 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 ISL1P61371 349 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 IFITM3Q01628 133 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 CARD16Q5EG05 197 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 Q6ZPB1 254 aaPredicted RBP11.72□□□□□ -0.53
RBM39-206ENST00000403542 LRRC8DQ7L1W4 858 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 CYP4Z1Q86W10 505 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 ARL10Q8N8L6 244 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 FKBP10Q96AY3 582 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 SH3YL1Q96HL8 342 aaPredicted RBP11.72□□□□□ -0.53
RBM39-206ENST00000403542 FUBP3Q96I24 572 aaKnown RBP eCLIP11.72□□□□□ -0.536e-6■■□□□ 13.2
RBM39-206ENST00000403542 MAGEH1Q9H213 219 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 LRTM1Q9HBL6 345 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 GPRC5BQ9NZH0 403 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 MTRRQ9UBK8 725 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 ZNF451Q9Y4E5 1061 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 PIKFYVEQ9Y2I7 2098 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 PFDN6O15212 129 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 RAD51BO15315 384 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 COCHO43405 550 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 SERPINB7O75635 380 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 BCKDHAP12694 445 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 CR2P20023 1033 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 GRSF1Q12849 480 aaKnown RBP eCLIP11.72□□□□□ -0.53
RBM39-206ENST00000403542 DDX39BQ13838 428 aaKnown RBP11.72□□□□□ -0.53
RBM39-206ENST00000403542 KIAA0040Q15053 153 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 DOK6Q6PKX4 331 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 DCP2Q8IU60 420 aaKnown RBP11.72□□□□□ -0.53
RBM39-206ENST00000403542 OR7A2PQ8NGA2 310 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 RBM4BQ9BQ04 359 aaKnown RBP11.72□□□□□ -0.53
RBM39-206ENST00000403542 RBM4Q9BWF3 364 aaKnown RBP11.72□□□□□ -0.53
RBM39-206ENST00000403542 RNF38Q9H0F5 515 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 TNKS2Q9H2K2 1166 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 TBCCD1Q9NVR7 557 aa11.72□□□□□ -0.53
RBM39-206ENST00000403542 NUDT4Q9NZJ9 180 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms